Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020148.1-P | Field mustard | cytosol | 98.29 | 98.29 |
| CDY09100 | Canola | cytosol | 87.03 | 84.16 |
| CDX70963 | Canola | cytosol | 67.24 | 65.23 |
| CDX88825 | Canola | cytosol | 66.89 | 64.9 |
| AT5G21130.1 | Thale cress | cytosol | 57.34 | 59.79 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 40.27 | 45.38 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 39.93 | 45.0 |
| PGSC0003DMT400005086 | Potato | plastid | 37.2 | 41.44 |
| KRH73453 | Soybean | plastid | 37.88 | 40.66 |
| KRH14686 | Soybean | plastid | 37.54 | 40.29 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 34.81 | 39.84 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 34.81 | 39.84 |
| Solyc01g009160.2.1 | Tomato | plastid | 35.84 | 39.77 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 35.84 | 39.33 |
| PGSC0003DMT400022474 | Potato | plastid | 35.49 | 38.52 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 33.11 | 35.27 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 31.74 | 35.23 |
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 32.42 | 34.42 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 31.4 | 34.33 |
| TraesCS4D01G124700.1 | Wheat | cytosol, extracellular, plasma membrane | 31.4 | 33.58 |
| TraesCSU01G059700.1 | Wheat | cytosol, extracellular, plasma membrane | 30.72 | 33.09 |
| TraesCSU01G191800.1 | Wheat | cytosol, extracellular, plasma membrane | 30.72 | 33.09 |
| TraesCS2A01G489400.1 | Wheat | cytosol, extracellular, plasma membrane | 29.69 | 32.58 |
| TraesCS2A01G489300.1 | Wheat | cytosol, extracellular, plasma membrane | 29.35 | 32.45 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 30.03 | 32.12 |
| TraesCS5A01G141200.1 | Wheat | cytosol, extracellular, peroxisome | 31.06 | 32.04 |
| TraesCS5D01G151200.1 | Wheat | cytosol, extracellular, plasma membrane | 31.06 | 31.93 |
| TraesCS5B01G139500.1 | Wheat | cytosol, extracellular, peroxisome | 30.72 | 31.8 |
| OQU87732 | Sorghum | cytosol | 31.74 | 31.53 |
| Zm00001d005010_P001 | Maize | plastid | 30.38 | 31.34 |
| HORVU4Hr1G026770.2 | Barley | cytosol, plasma membrane | 31.4 | 30.46 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 30.38 | 30.38 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 31.06 | 29.84 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 30.72 | 29.41 |
| Zm00001d043128_P001 | Maize | cytosol | 29.69 | 29.39 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 30.03 | 28.66 |
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 23.89 | 27.89 |
| CDY72163 | Canola | plastid | 23.55 | 27.82 |
| CDY16419 | Canola | plastid | 22.87 | 27.02 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 31.4 | 26.51 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 29.69 | 26.36 |
| CDY53530 | Canola | cytosol, nucleus, plasma membrane | 21.84 | 25.1 |
| CDX74604 | Canola | cytosol, nucleus, plasma membrane | 21.84 | 25.1 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 13.99 | 24.26 |
| EES09185 | Sorghum | plastid | 32.42 | 23.99 |
| HORVU3Hr1G079540.2 | Barley | plastid | 31.4 | 23.35 |
| Zm00001d028765_P001 | Maize | plastid | 23.55 | 22.12 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 26.62 | 20.8 |
| CDY26995 | Canola | cytosol | 21.5 | 20.52 |
| CDY38564 | Canola | plasma membrane | 22.18 | 10.25 |
Protein Annotations
| EnsemblPlants:CDY09101 | EnsemblPlantsGene:GSBRNA2T00001318001 | GO:A0A078F6T8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 | ProteinID:CDY09101 | ProteinID:CDY09101.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF0A71 | UniProt:A0A078F6T8 | MapMan:35.1 | : |
Description
BnaA02g05270DBnaA02g05270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6T8]
Coordinates
chrLK031993:+:101382..102263
Molecular Weight (calculated)
31944.6 Da
IEP (calculated)
9.874
GRAVY (calculated)
-0.130
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDGSTQRS PKNTDVLITD KNIPKTKHLS IDTNDSVPRS PRSSGGFTNA SRLSVDSQRP KPPSPGTYLV QIPREQIYRV PPPENARRYE DLSRRKPNRS
101: ACRRCCCYSL TVLLVLVTLA AVLVGIFFLV FRPHKPMFSV SGVSVAGINL TSSTSLISSL VEVKVRSENV NEKLGLIYGG GSAAEIFYDG AKLGDGEFTA
201: FDQPPENVTV TVTTLRGSRI QLTSSTLEDL KESEKKGKVP FDLRVKAPFK FKVGVVTMWT MAVTVDCKLT VNKLTSSATV ITENCVTEGI ILL
101: ACRRCCCYSL TVLLVLVTLA AVLVGIFFLV FRPHKPMFSV SGVSVAGINL TSSTSLISSL VEVKVRSENV NEKLGLIYGG GSAAEIFYDG AKLGDGEFTA
201: FDQPPENVTV TVTTLRGSRI QLTSSTLEDL KESEKKGKVP FDLRVKAPFK FKVGVVTMWT MAVTVDCKLT VNKLTSSATV ITENCVTEGI ILL
001: MTVEKPQEMT GDTNSDGFLT NKDVHRIKHP SLDTNDSSSS RYSVDSQKSR IGPPPGTYVI KLPKDQIYRV PPPENAHRYE YLSRRKTNKS CCRRCLCYSL
101: SALLIIIVLA AIAFGFFYLV YQPHKPQFSV SGVSVTGINL TSSSPFSPVI RIKLRSQNVK GKLGLIYEKG NEADVFFNGT KLGNGEFTAF KQPAGNVTVI
201: VTVLKGSSVK LKSSSRKELT ESQKKGKVPF GLRIKAPVKF KVGSVTTWTM TITVDCKITV DKLTASATVK TENCETGLSL L
101: SALLIIIVLA AIAFGFFYLV YQPHKPQFSV SGVSVTGINL TSSSPFSPVI RIKLRSQNVK GKLGLIYEKG NEADVFFNGT KLGNGEFTAF KQPAGNVTVI
201: VTVLKGSSVK LKSSSRKELT ESQKKGKVPF GLRIKAPVKF KVGSVTTWTM TITVDCKITV DKLTASATVK TENCETGLSL L
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q84VP8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.