Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU87732 | Sorghum | cytosol | 76.69 | 76.95 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 64.53 | 65.19 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 66.89 | 64.5 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 67.23 | 60.3 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 69.59 | 59.37 |
| Zm00001d028765_P001 | Maize | plastid | 56.76 | 53.85 |
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 44.93 | 52.99 |
| HORVU3Hr1G079540.2 | Barley | plastid | 67.91 | 51.02 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 28.04 | 49.11 |
| Zm00001d005010_P001 | Maize | plastid | 41.89 | 43.66 |
| KRH73453 | Soybean | plastid | 39.19 | 42.49 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 38.18 | 42.16 |
| KRH14686 | Soybean | plastid | 38.18 | 41.39 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 51.01 | 40.27 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 35.14 | 39.39 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 33.78 | 38.46 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 33.78 | 38.46 |
| PGSC0003DMT400022474 | Potato | plastid | 34.8 | 38.15 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 34.12 | 37.83 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 33.11 | 37.69 |
| Solyc01g009160.2.1 | Tomato | plastid | 32.43 | 36.36 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 31.42 | 36.33 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 31.42 | 36.33 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 31.42 | 36.33 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 31.08 | 35.38 |
| PGSC0003DMT400005086 | Potato | plastid | 31.42 | 35.36 |
| Zm00001d001832_P001 | Maize | plastid | 28.72 | 33.86 |
| Zm00001d013947_P001 | Maize | cytosol | 27.7 | 30.94 |
| CDX88825 | Canola | cytosol | 30.74 | 30.13 |
| Bra006594.1-P | Field mustard | nucleus | 30.74 | 30.13 |
| Bra020147.1-P | Field mustard | cytosol | 30.41 | 29.7 |
| CDY09101 | Canola | cytosol | 29.39 | 29.69 |
| Zm00001d032620_P001 | Maize | cytosol | 27.36 | 29.56 |
| AT5G21130.1 | Thale cress | cytosol | 28.04 | 29.54 |
| CDY09100 | Canola | cytosol | 30.07 | 29.37 |
| CDX70963 | Canola | cytosol | 29.73 | 29.14 |
| Bra020148.1-P | Field mustard | cytosol | 28.72 | 29.01 |
| Zm00001d005265_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 20.27 | 28.85 |
Protein Annotations
| EnsemblPlants:Zm00001d043128_P001 | EnsemblPlants:Zm00001d043128_T001 | EnsemblPlantsGene:Zm00001d043128 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 | ProteinID:ONM37069.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0008442781 | UniProt:A0A1D6N948 | MapMan:35.1 | : | : |
Description
NHL25
Coordinates
chr3:-:189863955..189864845
Molecular Weight (calculated)
31583.9 Da
IEP (calculated)
10.811
GRAVY (calculated)
-0.094
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIDSDEQPM MMHGNGHGHG RVHPASSSSD FSGEMNQSAV SDPSSSPLYS FHFEKPVPPP PPAGTYVVQV PKDKVFRVPP PENARLFDHY TRRARRRRRG
101: SCSCACLLVG AAVALAAALA GVLACLVLGP KPPAYAVQAL AVSGLVNASS SPAALSPGFD ATVRADNRNG RLGVRYEGGR GRVSVSYGGA LLADGAWPAL
201: YQAPRNVTVV VARARGSGVR LSRSVRGQLA AAERLRSVPF DMDVDVPVRL QLGVVRTWAV PLRARCTVAV DRLAADARVV SNSCDVKVRL LSWWRN
101: SCSCACLLVG AAVALAAALA GVLACLVLGP KPPAYAVQAL AVSGLVNASS SPAALSPGFD ATVRADNRNG RLGVRYEGGR GRVSVSYGGA LLADGAWPAL
201: YQAPRNVTVV VARARGSGVR LSRSVRGQLA AAERLRSVPF DMDVDVPVRL QLGVVRTWAV PLRARCTVAV DRLAADARVV SNSCDVKVRL LSWWRN
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.