Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13101 | Sorghum | cytosol | 86.06 | 87.45 |
| Os04t0677300-01 | Rice | plastid | 72.11 | 70.98 |
| TraesCS2A01G593300.1 | Wheat | peroxisome | 70.92 | 70.36 |
| HORVU2Hr1G119500.1 | Barley | peroxisome | 70.12 | 69.84 |
| TraesCS2B01G591000.1 | Wheat | peroxisome | 70.52 | 69.69 |
| TraesCS2D01G561400.1 | Wheat | peroxisome | 69.72 | 69.17 |
| GSMUA_Achr9P20600_001 | Banana | nucleus, peroxisome, plasma membrane | 43.03 | 45.0 |
| GSMUA_Achr1P17720_001 | Banana | plasma membrane | 43.43 | 40.07 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 38.25 | 39.34 |
| GSMUA_Achr3P14210_001 | Banana | plasma membrane | 37.45 | 38.84 |
| VIT_04s0069g01010.t01 | Wine grape | plasma membrane | 38.65 | 38.65 |
| Zm00001d013947_P001 | Maize | cytosol | 40.24 | 38.11 |
| CDY16419 | Canola | plastid | 37.45 | 37.9 |
| CDY72163 | Canola | plastid | 37.45 | 37.9 |
| Bra039737.1-P | Field mustard | plasma membrane, plastid | 37.05 | 37.5 |
| AT1G65690.1 | Thale cress | plasma membrane, plastid | 37.05 | 36.9 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 37.45 | 36.86 |
| AT5G36970.1 | Thale cress | nucleus, peroxisome, plasma membrane | 36.26 | 36.69 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 35.86 | 36.59 |
| Zm00001d032620_P001 | Maize | cytosol | 39.84 | 36.5 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 37.45 | 36.15 |
| CDY53530 | Canola | cytosol, nucleus, plasma membrane | 36.65 | 36.08 |
| KRH34277 | Soybean | plasma membrane | 35.86 | 35.71 |
| Bra028103.1-P | Field mustard | cytosol, nucleus, plasma membrane | 35.86 | 35.29 |
| CDX74604 | Canola | cytosol, nucleus, plasma membrane | 35.86 | 35.29 |
| KRG92519 | Soybean | cytosol | 35.06 | 35.2 |
| Solyc02g036480.1.1 | Tomato | nucleus | 34.26 | 33.59 |
| PGSC0003DMT400055257 | Potato | plasma membrane, plastid | 34.26 | 33.2 |
| VIT_16s0039g00340.t01 | Wine grape | cytosol | 37.85 | 32.99 |
| AT1G54540.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 31.08 | 32.64 |
| PGSC0003DMT400050761 | Potato | cytosol, plasma membrane, vacuole | 33.07 | 31.92 |
| PGSC0003DMT400039340 | Potato | plastid | 32.27 | 31.4 |
| Solyc03g019920.1.1 | Tomato | plastid | 30.28 | 30.77 |
| Zm00001d005265_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 25.5 | 30.77 |
| CDY26995 | Canola | cytosol | 37.45 | 30.62 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 31.87 | 29.74 |
| Zm00001d005010_P001 | Maize | plastid | 33.07 | 29.23 |
| Zm00001d043128_P001 | Maize | cytosol | 33.86 | 28.72 |
| Solyc02g081450.2.1 | Tomato | cytosol, plasma membrane, vacuole | 33.07 | 25.46 |
| Zm00001d028765_P001 | Maize | plastid | 25.9 | 20.83 |
| CDY38564 | Canola | plasma membrane | 37.45 | 14.83 |
Protein Annotations
| EnsemblPlants:Zm00001d001832_P001 | EnsemblPlants:Zm00001d001832_T001 | EnsemblPlantsGene:Zm00001d001832 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF20 | PFAM:PF03168 | ProteinID:ONM12122.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI000189D739 | UniProt:A0A1D6DTB9 | MapMan:35.1 | : | : |
Description
NDR1/HIN1-like 25
Coordinates
chr2:+:1623040..1623795
Molecular Weight (calculated)
26927.6 Da
IEP (calculated)
10.488
GRAVY (calculated)
-0.064
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MADYHRIHPV SAGSPPPPSA PPEQASRSGK KPSHDQLPVT APAPAPPPPP PPPPSRRKRS RCCRCVCYTV LALVLLAVAL GATAGILYLV FRPKIPTFHV
101: DRLTVTRFDV NGTSATVTDA FDVDVTADNP NRRIGIYYDG GDVTASFNGT VLCSGAFPAL YQGHRTTVHP RISLAGETRL DSAVAAQLLQ QRAAGFVPLT
201: VRARVPIRIK FGAVRLWTMT GKANCNLVVD NIQAGTQLSI RSNSCTFKLK I
101: DRLTVTRFDV NGTSATVTDA FDVDVTADNP NRRIGIYYDG GDVTASFNGT VLCSGAFPAL YQGHRTTVHP RISLAGETRL DSAVAAQLLQ QRAAGFVPLT
201: VRARVPIRIK FGAVRLWTMT GKANCNLVVD NIQAGTQLSI RSNSCTFKLK I
001: MSDHQKIHPV SDPEAPPHPT APLVPRGSSR SEHGDPTKTQ QAAPLDPPRE KKGSRSCWCR CVCYTLLVLF LLIVIVGAIV GILYLVFRPK FPDYNIDRLQ
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
Arabidopsis Description
NHL25NHL25 [Source:UniProtKB/TrEMBL;Acc:A0A178UFH9]
SUBAcon: [peroxisome,nucleus,plasma membrane]
SUBAcon: [peroxisome,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.