Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- plasma membrane 3
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92519 | Soybean | cytosol | 93.25 | 94.0 |
| Solyc03g019920.1.1 | Tomato | plastid | 64.68 | 65.99 |
| PGSC0003DMT400039340 | Potato | plastid | 66.67 | 65.12 |
| VIT_16s0039g00340.t01 | Wine grape | cytosol | 73.02 | 63.89 |
| GSMUA_Achr5P11970_001 | Banana | cytosol, peroxisome, plasma membrane | 56.75 | 58.13 |
| AT1G54540.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 52.78 | 55.65 |
| GSMUA_Achr3P14210_001 | Banana | plasma membrane | 50.79 | 52.89 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 51.19 | 52.87 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 51.59 | 52.85 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 55.95 | 52.42 |
| TraesCS1A01G167100.1 | Wheat | cytosol, nucleus, peroxisome | 51.19 | 50.99 |
| TraesCS1B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 52.78 | 50.0 |
| GSMUA_Achr9P20600_001 | Banana | nucleus, peroxisome, plasma membrane | 47.62 | 50.0 |
| TraesCS1D01G173800.1 | Wheat | cytosol, nucleus, plasma membrane | 52.38 | 49.62 |
| HORVU1Hr1G044080.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 51.19 | 49.62 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 48.81 | 48.24 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 48.02 | 46.54 |
| KXG38271 | Sorghum | cytosol, nucleus, vacuole | 48.81 | 44.57 |
| Zm00001d032620_P001 | Maize | cytosol | 48.41 | 44.53 |
| Zm00001d013947_P001 | Maize | cytosol | 46.43 | 44.15 |
| GSMUA_Achr1P17720_001 | Banana | plasma membrane | 44.44 | 41.18 |
| OQU85155 | Sorghum | extracellular, plasma membrane | 30.16 | 38.78 |
| EES13101 | Sorghum | cytosol | 36.51 | 37.25 |
| TraesCS4A01G216800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.14 | 36.65 |
| Os04t0677300-01 | Rice | plastid | 36.9 | 36.47 |
| TraesCS4A01G217000.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 32.54 | 36.28 |
| TraesCS4D01G091900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.54 | 36.28 |
| HORVU2Hr1G119500.1 | Barley | peroxisome | 36.11 | 36.11 |
| Zm00001d001832_P001 | Maize | plastid | 35.71 | 35.86 |
| TraesCS4D01G092200.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 31.35 | 35.11 |
| TraesCS4B01G095400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.14 | 34.91 |
| TraesCS2D01G561400.1 | Wheat | peroxisome | 34.92 | 34.78 |
| TraesCS4B01G095300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 30.95 | 34.51 |
| TraesCS2A01G593300.1 | Wheat | peroxisome | 34.52 | 34.39 |
| HORVU4Hr1G018760.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 31.75 | 34.19 |
| TraesCS2B01G591000.1 | Wheat | peroxisome | 34.13 | 33.86 |
| OQU90204 | Sorghum | mitochondrion, plastid | 28.97 | 33.49 |
| EES06862 | Sorghum | peroxisome | 28.97 | 30.93 |
| Os02t0507900-00 | Rice | cytosol | 30.56 | 30.8 |
| KRH73453 | Soybean | plastid | 32.94 | 30.4 |
| KRH14686 | Soybean | plastid | 32.54 | 30.04 |
| KRH26927 | Soybean | cytosol | 19.05 | 28.92 |
| KRH22411 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 23.41 | 25.43 |
| HORVU4Hr1G018720.1 | Barley | cytosol | 15.08 | 24.36 |
| OQU88420 | Sorghum | mitochondrion | 30.56 | 22.06 |
Protein Annotations
| EMBL:ACUP02006588 | EnsemblPlants:KRH34277 | EnsemblPlantsGene:GLYMA_10G174100 | EntrezGene:100813932 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF48 | PFAM:PF03168 | ProteinID:KRH34277 |
| ProteinID:KRH34277.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000233CF57 | UniProt:I1LBZ4 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr10:-:40785837..40786595
Molecular Weight (calculated)
27953.6 Da
IEP (calculated)
10.024
GRAVY (calculated)
-0.026
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHQRLRIH PMEGEAPPPP TTPLVPPGSS RSEKGVPLHH PPPLPRAMPA AYPTPHKRSS SCCCKCICWT IILVVLLLII FAASVGILYL VFQPKLPDYS
101: VDTLRISDLR LNFDMSLYAK FDVKITATNP NKKIGIYYEK GGKLSVWYTN TRLCEGSLPQ FYQGHENKTV LNVSLSGQVQ SGSTLMNALQ QQQQTGRIPL
201: DLKVHAPIAI KLGRLKLMKV RVLGECLLVV DSLSSNNLIS IKASNCKFRL KL
101: VDTLRISDLR LNFDMSLYAK FDVKITATNP NKKIGIYYEK GGKLSVWYTN TRLCEGSLPQ FYQGHENKTV LNVSLSGQVQ SGSTLMNALQ QQQQTGRIPL
201: DLKVHAPIAI KLGRLKLMKV RVLGECLLVV DSLSSNNLIS IKASNCKFRL KL
001: MSDHQKIHPV SDPEAPPHPT APLVPRGSSR SEHGDPTKTQ QAAPLDPPRE KKGSRSCWCR CVCYTLLVLF LLIVIVGAIV GILYLVFRPK FPDYNIDRLQ
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
Arabidopsis Description
NHL25NHL25 [Source:UniProtKB/TrEMBL;Acc:A0A178UFH9]
SUBAcon: [peroxisome,nucleus,plasma membrane]
SUBAcon: [peroxisome,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.