Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13101 | Sorghum | cytosol | 72.55 | 74.9 |
| HORVU2Hr1G119500.1 | Barley | peroxisome | 71.76 | 72.62 |
| Zm00001d001832_P001 | Maize | plastid | 70.98 | 72.11 |
| TraesCS2D01G561400.1 | Wheat | peroxisome | 70.59 | 71.15 |
| TraesCS2B01G591000.1 | Wheat | peroxisome | 70.59 | 70.87 |
| TraesCS2A01G593300.1 | Wheat | peroxisome | 69.8 | 70.36 |
| GSMUA_Achr9P20600_001 | Banana | nucleus, peroxisome, plasma membrane | 43.53 | 46.25 |
| GSMUA_Achr3P14210_001 | Banana | plasma membrane | 39.61 | 41.74 |
| GSMUA_Achr1P17720_001 | Banana | plasma membrane | 43.53 | 40.81 |
| CDY16419 | Canola | plastid | 39.61 | 40.73 |
| CDY72163 | Canola | plastid | 39.61 | 40.73 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 38.82 | 40.57 |
| Bra039737.1-P | Field mustard | plasma membrane, plastid | 39.22 | 40.32 |
| AT1G65690.1 | Thale cress | plasma membrane, plastid | 38.43 | 38.89 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 37.25 | 38.62 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 38.04 | 38.04 |
| AT5G36970.1 | Thale cress | nucleus, peroxisome, plasma membrane | 36.86 | 37.9 |
| VIT_04s0069g01010.t01 | Wine grape | plasma membrane | 37.25 | 37.85 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 37.65 | 36.92 |
| KRH34277 | Soybean | plasma membrane | 36.47 | 36.9 |
| CDY53530 | Canola | cytosol, nucleus, plasma membrane | 36.47 | 36.47 |
| Bra028103.1-P | Field mustard | cytosol, nucleus, plasma membrane | 36.08 | 36.08 |
| CDX74604 | Canola | cytosol, nucleus, plasma membrane | 36.08 | 36.08 |
| KRG92519 | Soybean | cytosol | 35.29 | 36.0 |
| AT1G54540.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 33.33 | 35.56 |
| PGSC0003DMT400055257 | Potato | plasma membrane, plastid | 36.08 | 35.52 |
| Solyc02g036480.1.1 | Tomato | nucleus | 35.29 | 35.16 |
| PGSC0003DMT400050761 | Potato | cytosol, plasma membrane, vacuole | 34.51 | 33.85 |
| VIT_16s0039g00340.t01 | Wine grape | cytosol | 38.04 | 33.68 |
| PGSC0003DMT400039340 | Potato | plastid | 33.73 | 33.33 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 34.51 | 32.71 |
| Solyc03g019920.1.1 | Tomato | plastid | 31.37 | 32.39 |
| CDY26995 | Canola | cytosol | 37.65 | 31.27 |
| Os09t0267400-01 | Rice | plasma membrane | 24.31 | 29.52 |
| Os08t0324200-01 | Rice | cytosol | 27.84 | 29.34 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 30.59 | 28.36 |
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 29.8 | 27.54 |
| Solyc02g081450.2.1 | Tomato | cytosol, plasma membrane, vacuole | 34.12 | 26.69 |
| Os02t0507900-00 | Rice | cytosol | 25.88 | 26.4 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 30.98 | 22.77 |
| CDY38564 | Canola | plasma membrane | 37.25 | 14.98 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4337404 | ProteinID:BAF16177.1 | ProteinID:BAS91635.1 | ProteinID:CAE05763.2 | ProteinID:EAZ32414.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0046983 | EMBL:KY050767 | InterPro:LEA_2 | EnsemblPlantsGene:Os04g0677300 | EnsemblPlants:Os04t0677300-01 | PFAM:PF03168 |
| PANTHER:PTHR31852 | PANTHER:PTHR31852:SF20 | UniProt:Q7XKB7 | TMHMM:TMhelix | UniParc:UPI00001B173D | RefSeq:XP_015634205.1 |
| SEG:seg | : | : | : | : | : |
Description
Harpin-induced 1 domain containing protein. (Os04t0677300-01)
Coordinates
chr4:-:34597648..34598755
Molecular Weight (calculated)
27790.8 Da
IEP (calculated)
10.663
GRAVY (calculated)
-0.067
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYHRIHPVG VGSPAPAPDS QQQVGKGRST ASYGEKEQLP ITAPRPYAPA PLPPPPPRRR SRGRRCCRCV CWTLLAVLVL AVALGATAGI LYAVFKPKIP
101: DFHVDRLTVT RFDVNATAAT VSDAFEVEVT STNPNRRIGI YYDGGEVTAS FNGTELCRGG FPALYQGHRS TVRPVILLAG ETRLDSAVAL QLARQQQAGF
201: VPLTVWARVP IRIKFGAIKL WKMTGKATCN LVVDNLVAGR QIRIRSNSCS FKLKV
101: DFHVDRLTVT RFDVNATAAT VSDAFEVEVT STNPNRRIGI YYDGGEVTAS FNGTELCRGG FPALYQGHRS TVRPVILLAG ETRLDSAVAL QLARQQQAGF
201: VPLTVWARVP IRIKFGAIKL WKMTGKATCN LVVDNLVAGR QIRIRSNSCS FKLKV
001: MSQHQKIYPV QDPEAATARP TAPLVPRGSS RSEHGDPSKV PLNQRPQRFV PLAPPKKRRS CCCRCFCYTF CFLLLLVVAV GASIGILYLV FKPKLPDYSI
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL
101: DRLQLTRFAL NQDSSLTTAF NVTITAKNPN EKIGIYYEDG SKITVWYMEH QLSNGSLPKF YQGHENTTVI YVEMTGQTQN ASGLRTTLEE QQQRTGNIPL
201: RIRVNQPVRV KFGKLKLFEV RFLVRCGVFV DSLATNNVIK IQSSSCKFRL RL
Arabidopsis Description
NHL6NDR1/HIN1-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8LD98]
SUBAcon: [plasma membrane,plastid]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.