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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • plasma membrane 2
  • peroxisome 1
  • mitochondrion 1
  • plastid 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:golgi, mitochondrion, nucleus, peroxisome, plastid
PProwler:secretory
WoLF PSORT:cytosol
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74604 Canola cytosol, nucleus, plasma membrane 98.43 98.43
CDY53530 Canola cytosol, nucleus, plasma membrane 98.04 98.04
AT5G36970.1 Thale cress nucleus, peroxisome, plasma membrane 83.92 86.29
Bra039737.1-P Field mustard plasma membrane, plastid 67.45 69.35
VIT_04s0069g01010.t01 Wine grape plasma membrane 54.9 55.78
KRH72891 Soybean nucleus, peroxisome, plasma membrane 54.51 54.51
KRH17244 Soybean cytosol, peroxisome, plasma membrane 55.29 54.23
PGSC0003DMT400055257 Potato plasma membrane, plastid 54.12 53.28
Solyc02g036480.1.1 Tomato nucleus 53.33 53.12
GSMUA_Achr5P11970_001 Banana cytosol, peroxisome, plasma membrane 47.84 49.59
KRH30725 Soybean cytosol, nucleus, plasma membrane 47.45 49.19
KRG98056 Soybean cytosol, peroxisome, plasma membrane 45.88 47.95
PGSC0003DMT400050761 Potato cytosol, plasma membrane, vacuole 47.84 46.92
GSMUA_Achr9P20600_001 Banana nucleus, peroxisome, plasma membrane 42.75 45.42
TraesCS1A01G167100.1 Wheat cytosol, nucleus, peroxisome 44.31 44.66
GSMUA_Achr3P14210_001 Banana plasma membrane 41.96 44.21
TraesCS1D01G173800.1 Wheat cytosol, nucleus, plasma membrane 45.49 43.61
HORVU1Hr1G044080.1 Barley cytosol, endoplasmic reticulum, peroxisome 44.31 43.46
TraesCS1B01G183500.1 Wheat cytosol, nucleus, plasma membrane 45.1 43.23
GSMUA_Achr1P17720_001 Banana plasma membrane 43.14 40.44
KXG38271 Sorghum cytosol, nucleus, vacuole 41.57 38.41
EES13101 Sorghum cytosol 36.86 38.06
Zm00001d032620_P001 Maize cytosol 40.39 37.59
Solyc02g081450.2.1 Tomato cytosol, plasma membrane, vacuole 47.45 37.12
Bra027969.1-P Field mustard cytosol, peroxisome, plasma membrane 38.82 36.8
TraesCS2A01G593300.1 Wheat peroxisome 36.47 36.76
TraesCS2D01G561400.1 Wheat peroxisome 36.47 36.76
OQU85155 Sorghum extracellular, plasma membrane 28.24 36.73
Zm00001d013947_P001 Maize cytosol 38.04 36.6
HORVU2Hr1G119500.1 Barley peroxisome 36.08 36.51
TraesCS2B01G591000.1 Wheat peroxisome 36.08 36.22
Os04t0677300-01 Rice plastid 36.08 36.08
Zm00001d001832_P001 Maize plastid 35.29 35.86
TraesCS4A01G217000.1 Wheat cytosol, endoplasmic reticulum, peroxisome, plastid 29.41 33.19
TraesCS4A01G216800.1 Wheat cytosol, endoplasmic reticulum, peroxisome 28.63 33.03
TraesCS4D01G092200.1 Wheat cytosol, endoplasmic reticulum, peroxisome 29.02 32.89
TraesCS4B01G095400.1 Wheat cytosol, endoplasmic reticulum, peroxisome 29.8 32.76
TraesCS4D01G091900.1 Wheat cytosol, endoplasmic reticulum, peroxisome 29.02 32.74
TraesCS4B01G095300.1 Wheat cytosol, endoplasmic reticulum, peroxisome 29.02 32.74
HORVU4Hr1G018760.1 Barley cytosol, endoplasmic reticulum, peroxisome 29.8 32.48
OQU90204 Sorghum mitochondrion, plastid 27.06 31.65
EES06862 Sorghum peroxisome 27.45 29.66
Bra034321.1-P Field mustard cytosol, peroxisome, plasma membrane 30.2 29.62
Os02t0507900-00 Rice cytosol 29.02 29.6
Bra000526.1-P Field mustard cytosol, peroxisome, plasma membrane 29.41 29.3
HORVU4Hr1G018720.1 Barley cytosol 14.9 24.36
Bra020148.1-P Field mustard cytosol 25.1 21.84
OQU88420 Sorghum mitochondrion 28.63 20.92
Bra006594.1-P Field mustard nucleus 24.71 20.86
Bra020147.1-P Field mustard cytosol 24.71 20.79
Protein Annotations
MapMan:35.1EnsemblPlantsGene:Bra028103EnsemblPlants:Bra028103.1EnsemblPlants:Bra028103.1-PGO:GO:0005575GO:GO:0006950
GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0009605GO:GO:0009607GO:GO:0009719
GO:GO:0009814GO:GO:0009863GO:GO:0009987GO:GO:0016020GO:GO:0016021InterPro:LEA_2
UniProt:M4EH38PFAM:PF03168PANTHER:PTHR31852PANTHER:PTHR31852:SF1TMHMM:TMhelixUniParc:UPI00025441E5
SEG:seg:::::
Description
AT5G36970 (E=1e-097) NHL25 | NHL25 (NDR1/HIN1-LIKE 25)
Coordinates
chrA04:-:5751508..5752592
Molecular Weight (calculated)
28753.1 Da
IEP (calculated)
10.343
GRAVY (calculated)
-0.200
Length
255 amino acids
Sequence
(BLAST)
001: MSEHLKIHPV SDPEAPLPPT HPTVPRVSRG SSRSEHGDTT KESVTQPPQL DSPQRKKKGR RSCWCRCVCY TLLVLFLLIV VVGAAVGILY LVFRPKLPDY
101: NIDRLQLTRS ILNNQDSSLS TAFNVTITAK NPNEKIGIYY EDGSKISVLY MQTRLSNGSL PKFYQGHENT TIIFVEMTGY TQNATSLMAT LLEQQQLTGS
201: IPLRIRVTQP VRIKLGKLKL PEVKFFVRCG VFVDSLSANS VIRVRNSNCK FRFRL
Best Arabidopsis Sequence Match ( AT5G36970.1 )
(BLAST)
001: MSDHQKIHPV SDPEAPPHPT APLVPRGSSR SEHGDPTKTQ QAAPLDPPRE KKGSRSCWCR CVCYTLLVLF LLIVIVGAIV GILYLVFRPK FPDYNIDRLQ
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
Arabidopsis Description
NHL25NHL25 [Source:UniProtKB/TrEMBL;Acc:A0A178UFH9]
SUBAcon: [peroxisome,nucleus,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.