Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 3
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU85155 | Sorghum | extracellular, plasma membrane | 70.18 | 78.06 |
| KXG38271 | Sorghum | cytosol, nucleus, vacuole | 73.85 | 58.33 |
| OQU88420 | Sorghum | mitochondrion | 87.16 | 54.44 |
| Zm00001d013947_P001 | Maize | cytosol | 64.22 | 52.83 |
| Zm00001d032620_P001 | Maize | cytosol | 65.14 | 51.82 |
| HORVU1Hr1G044080.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 57.34 | 48.08 |
| TraesCS1D01G173800.1 | Wheat | cytosol, nucleus, plasma membrane | 58.26 | 47.74 |
| TraesCS1A01G167100.1 | Wheat | cytosol, nucleus, peroxisome | 55.05 | 47.43 |
| TraesCS1B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 57.8 | 47.37 |
| GSMUA_Achr5P11970_001 | Banana | cytosol, peroxisome, plasma membrane | 45.41 | 40.24 |
| EES06862 | Sorghum | peroxisome | 36.7 | 33.9 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 34.4 | 30.74 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 34.4 | 30.49 |
| Bra039737.1-P | Field mustard | plasma membrane, plastid | 34.4 | 30.24 |
| CDY16419 | Canola | plastid | 34.4 | 30.24 |
| Solyc03g019920.1.1 | Tomato | plastid | 33.95 | 29.96 |
| PGSC0003DMT400039340 | Potato | plastid | 34.4 | 29.07 |
| CDY72163 | Canola | plastid | 33.03 | 29.03 |
| AT1G65690.1 | Thale cress | plasma membrane, plastid | 33.49 | 28.97 |
| KRH34277 | Soybean | plasma membrane | 33.49 | 28.97 |
| KRG92519 | Soybean | cytosol | 33.03 | 28.8 |
| EES13101 | Sorghum | cytosol | 32.57 | 28.74 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 33.49 | 28.63 |
| PGSC0003DMT400055257 | Potato | plasma membrane, plastid | 33.95 | 28.57 |
| AT5G36970.1 | Thale cress | nucleus, peroxisome, plasma membrane | 32.11 | 28.23 |
| Solyc02g036480.1.1 | Tomato | nucleus | 33.03 | 28.12 |
| PGSC0003DMT400050761 | Potato | cytosol, plasma membrane, vacuole | 33.49 | 28.08 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 33.03 | 27.69 |
| VIT_04s0069g01010.t01 | Wine grape | plasma membrane | 31.19 | 27.09 |
| CDY53530 | Canola | cytosol, nucleus, plasma membrane | 31.65 | 27.06 |
| CDX74604 | Canola | cytosol, nucleus, plasma membrane | 31.65 | 27.06 |
| Bra028103.1-P | Field mustard | cytosol, nucleus, plasma membrane | 31.65 | 27.06 |
| AT1G54540.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 28.9 | 26.36 |
| EER98613 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 24.31 | 25.48 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 31.19 | 25.28 |
| VIT_16s0039g00340.t01 | Wine grape | cytosol | 32.57 | 24.65 |
| CDY26995 | Canola | cytosol | 32.57 | 23.13 |
| OQU87732 | Sorghum | cytosol | 31.19 | 23.05 |
| Solyc02g081450.2.1 | Tomato | cytosol, plasma membrane, vacuole | 33.49 | 22.39 |
| EES15581 | Sorghum | cytosol, mitochondrion, peroxisome | 27.06 | 19.34 |
| EES09185 | Sorghum | plastid | 28.44 | 15.66 |
| CDY38564 | Canola | plasma membrane | 33.03 | 11.36 |
Protein Annotations
| EnsemblPlants:OQU90204 | EnsemblPlantsGene:SORBI_3002G363901 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:LEA_2 |
| PANTHER:PTHR31852 | PANTHER:PTHR31852:SF1 | PFAM:PF03168 | ProteinID:OQU90204 | ProteinID:OQU90204.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0009DC8F61 | UniProt:A0A1W0W711 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr2:+:72497301..72498136
Molecular Weight (calculated)
23446.5 Da
IEP (calculated)
10.479
GRAVY (calculated)
0.182
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVFCGRVGA TLLTSTALYL FPRRWRPATT TRKEKKGAVD SRIVFAVLNL RGRGCCCRLL CCAVVTAVVL AVLAAAAVGA LYLALDPKAP RYSVDRLSVS
101: AFQVDPSTVT AQARFDVTVT AANPNSRIGI QYEPGSSLRV WYQSYRLERG ALPAFYQGHR NTTVLPPALA GEVQLATAVV SGLQDAQRTG AVPLVFRADV
201: PVRVEVGSFK GREKSSQS
101: AFQVDPSTVT AQARFDVTVT AANPNSRIGI QYEPGSSLRV WYQSYRLERG ALPAFYQGHR NTTVLPPALA GEVQLATAVV SGLQDAQRTG AVPLVFRADV
201: PVRVEVGSFK GREKSSQS
001: MSDHQKIHPV SDPEAPPHPT APLVPRGSSR SEHGDPTKTQ QAAPLDPPRE KKGSRSCWCR CVCYTLLVLF LLIVIVGAIV GILYLVFRPK FPDYNIDRLQ
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
101: LTRFQLNQDL SLSTAFNVTI TAKNPNEKIG IYYEDGSKIS VLYMQTRISN GSLPKFYQGH ENTTIILVEM TGFTQNATSL MTTLQEQQRL TGSIPLRIRV
201: TQPVRIKLGK LKLMKVRFLV RCGVSVDSLA ANSVIRVRSS NCKYRFRL
Arabidopsis Description
NHL25NHL25 [Source:UniProtKB/TrEMBL;Acc:A0A178UFH9]
SUBAcon: [peroxisome,nucleus,plasma membrane]
SUBAcon: [peroxisome,nucleus,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.