Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH34277 | Soybean | plasma membrane | 94.0 | 93.25 |
| Solyc03g019920.1.1 | Tomato | plastid | 64.4 | 65.18 |
| PGSC0003DMT400039340 | Potato | plastid | 66.4 | 64.34 |
| VIT_16s0039g00340.t01 | Wine grape | cytosol | 70.0 | 60.76 |
| GSMUA_Achr5P11970_001 | Banana | cytosol, peroxisome, plasma membrane | 55.6 | 56.5 |
| AT1G54540.1 | Thale cress | cytosol, peroxisome, plasma membrane, plastid | 53.2 | 55.65 |
| Bra027969.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 56.8 | 52.79 |
| KRG98056 | Soybean | cytosol, peroxisome, plasma membrane | 50.8 | 52.05 |
| KRH30725 | Soybean | cytosol, nucleus, plasma membrane | 51.2 | 52.03 |
| GSMUA_Achr3P14210_001 | Banana | plasma membrane | 49.6 | 51.24 |
| GSMUA_Achr9P20600_001 | Banana | nucleus, peroxisome, plasma membrane | 47.2 | 49.17 |
| TraesCS1A01G167100.1 | Wheat | cytosol, nucleus, peroxisome | 49.2 | 48.62 |
| KRH72891 | Soybean | nucleus, peroxisome, plasma membrane | 48.8 | 47.84 |
| TraesCS1B01G183500.1 | Wheat | cytosol, nucleus, plasma membrane | 50.4 | 47.37 |
| HORVU1Hr1G044080.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 49.2 | 47.31 |
| TraesCS1D01G173800.1 | Wheat | cytosol, nucleus, plasma membrane | 50.0 | 46.99 |
| KRH17244 | Soybean | cytosol, peroxisome, plasma membrane | 48.4 | 46.54 |
| KXG38271 | Sorghum | cytosol, nucleus, vacuole | 46.8 | 42.39 |
| Zm00001d032620_P001 | Maize | cytosol | 46.0 | 41.97 |
| Zm00001d013947_P001 | Maize | cytosol | 44.4 | 41.89 |
| GSMUA_Achr1P17720_001 | Banana | plasma membrane | 44.4 | 40.81 |
| OQU85155 | Sorghum | extracellular, plasma membrane | 29.6 | 37.76 |
| EES13101 | Sorghum | cytosol | 36.4 | 36.84 |
| TraesCS4A01G216800.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.0 | 36.2 |
| HORVU2Hr1G119500.1 | Barley | peroxisome | 36.4 | 36.11 |
| TraesCS4A01G217000.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 32.4 | 35.84 |
| TraesCS2D01G561400.1 | Wheat | peroxisome | 36.0 | 35.57 |
| TraesCS4D01G091900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.0 | 35.4 |
| Os04t0677300-01 | Rice | plastid | 36.0 | 35.29 |
| TraesCS2A01G593300.1 | Wheat | peroxisome | 35.6 | 35.18 |
| Zm00001d001832_P001 | Maize | plastid | 35.2 | 35.06 |
| TraesCS4D01G092200.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 31.2 | 34.67 |
| TraesCS2B01G591000.1 | Wheat | peroxisome | 35.2 | 34.65 |
| TraesCS4B01G095400.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 32.0 | 34.48 |
| HORVU4Hr1G018760.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 31.6 | 33.76 |
| TraesCS4B01G095300.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 30.4 | 33.63 |
| OQU90204 | Sorghum | mitochondrion, plastid | 28.8 | 33.03 |
| EES06862 | Sorghum | peroxisome | 28.4 | 30.08 |
| KRH73453 | Soybean | plastid | 32.8 | 30.04 |
| Os02t0507900-00 | Rice | cytosol | 30.0 | 30.0 |
| KRH14686 | Soybean | plastid | 32.4 | 29.67 |
| KRH26927 | Soybean | cytosol | 18.8 | 28.31 |
| KRH22411 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 24.0 | 25.86 |
| HORVU4Hr1G018720.1 | Barley | cytosol | 15.2 | 24.36 |
| OQU88420 | Sorghum | mitochondrion | 30.0 | 21.49 |
Protein Annotations
| EMBL:ACUP02012760 | EnsemblPlants:KRG92519 | EnsemblPlantsGene:GLYMA_20G216300 | EntrezGene:100780820 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF48 | PFAM:PF03168 | ProteinID:KRG92519 |
| ProteinID:KRG92519.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000189D734 | UniProt:A0A0R0EP65 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr20:+:45200572..45201707
Molecular Weight (calculated)
27936.8 Da
IEP (calculated)
10.345
GRAVY (calculated)
-0.042
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MADHQRLRIH PMEGEAPPPP PTTPLVPPGS SKSEKRIPLH HPPQLRAMPA AYPTAHKRSC CCKCICWIIT LLVLLLIILA ASVGILYLVF KPKLPDYSVD
101: TLRISDLRLN FDMSLYARFD VKITATNPNK KIGIYYKKGG RLSVWYTNTR LCEGSLPQFY QGHENKTMLN VSLSGQVQSG STLMNALQQQ QQTGRIPLDL
201: KVHAPIAIKL GRLKLMKVRV LGECLLVVDS LSSNNLISIK ASNCKFRLKL
101: TLRISDLRLN FDMSLYARFD VKITATNPNK KIGIYYKKGG RLSVWYTNTR LCEGSLPQFY QGHENKTMLN VSLSGQVQSG STLMNALQQQ QQTGRIPLDL
201: KVHAPIAIKL GRLKLMKVRV LGECLLVVDS LSSNNLISIK ASNCKFRLKL
001: MGDQQKIHPV LQMEANKTKT TTPAPGKTVL LPVQRPIPPP VIPSKNRNMC CKIFCWVLSL LVIALIALAI AVAVVYFVFH PKLPSYEVNS LRVTNLGINL
101: DLSLSAEFKV EITARNPNEK IGIYYEKGGH IGVWYDKTKL CEGPIPRFYQ GHRNVTKLNV ALTGRAQYGN TVLAALQQQQ QTGRVPLDLK VNAPVAIKLG
201: NLKMKKIRIL GSCKLVVDSL STNNNINIKA SDCSFKAKL
101: DLSLSAEFKV EITARNPNEK IGIYYEKGGH IGVWYDKTKL CEGPIPRFYQ GHRNVTKLNV ALTGRAQYGN TVLAALQQQQ QTGRVPLDLK VNAPVAIKLG
201: NLKMKKIRIL GSCKLVVDSL STNNNINIKA SDCSFKAKL
Arabidopsis Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [Source:UniProtKB/TrEMBL;Acc:Q9SLI0]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
SUBAcon: [peroxisome,plastid,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.