Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G336800.1 | Wheat | cytosol | 60.52 | 71.67 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 63.11 | 71.34 |
| OQU87732 | Sorghum | cytosol | 59.94 | 70.51 |
| Zm00001d043128_P001 | Maize | cytosol | 59.37 | 69.59 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 64.55 | 67.88 |
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 42.94 | 59.36 |
| HORVU3Hr1G079540.2 | Barley | plastid | 65.71 | 57.87 |
| HORVU5Hr1G058740.3 | Barley | cytosol, plastid | 26.22 | 53.85 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 35.16 | 45.52 |
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 35.45 | 44.57 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 35.16 | 44.36 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 47.55 | 44.0 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 32.56 | 42.8 |
| KRH73453 | Soybean | plastid | 33.43 | 42.49 |
| KRH14686 | Soybean | plastid | 33.43 | 42.49 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 30.84 | 41.15 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 30.84 | 41.15 |
| PGSC0003DMT400022474 | Potato | plastid | 31.7 | 40.74 |
| PGSC0003DMT400005086 | Potato | plastid | 30.84 | 40.68 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 31.12 | 40.45 |
| Zm00001d028765_P001 | Maize | plastid | 36.02 | 40.06 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 29.97 | 40.0 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 28.82 | 39.06 |
| Solyc01g009160.2.1 | Tomato | plastid | 29.68 | 39.02 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 28.53 | 38.67 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 28.53 | 38.67 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 27.95 | 37.31 |
| Os09t0267400-01 | Rice | plasma membrane | 20.75 | 34.29 |
| Bra020147.1-P | Field mustard | cytosol | 27.67 | 31.68 |
| Os08t0324200-01 | Rice | cytosol | 21.9 | 31.41 |
| CDY09101 | Canola | cytosol | 26.51 | 31.4 |
| CDY09100 | Canola | cytosol | 27.38 | 31.35 |
| Os04t0677300-01 | Rice | plastid | 22.77 | 30.98 |
| Bra020148.1-P | Field mustard | cytosol | 25.94 | 30.72 |
| AT5G21130.1 | Thale cress | cytosol | 24.78 | 30.61 |
| Bra006594.1-P | Field mustard | nucleus | 26.22 | 30.13 |
| CDX88825 | Canola | cytosol | 26.22 | 30.13 |
| CDX70963 | Canola | cytosol | 25.65 | 29.47 |
| Os02t0507900-00 | Rice | cytosol | 19.02 | 26.4 |
Protein Annotations
| EnsemblPlants:Os01t0812100-01 | EnsemblPlantsGene:Os01g0812100 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:LEA_2 |
| PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 | ProteinID:BAS74881.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0003939B2B | UniProt:A0A0N7KDY1 | MapMan:35.1 | : | : | : |
Description
Similar to NHL25. (Os01t0812100-01)
Coordinates
chr1:+:34524498..34526528
Molecular Weight (calculated)
37386.9 Da
IEP (calculated)
10.829
GRAVY (calculated)
-0.156
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: RNSGTHRDRS RRERRAVSSS KLCKIDSDAR LEEQPMVPHG RVHPAAAASS SDFSGEMNQS AASSDPSSSP PYSFHFEKPL PPTAAAPPPA DARRYQQLLP
101: APQPGTYVVQ MPKDKVFRVP PPENARLFQH YTRRARRRAR CSCARVCSWL LLALVLLAAA LAASAAVVYL VFKPRQPDYT LLSLAVSGLG GILGNASSTA
201: APAPVSFSPE FDATVRADNP NGKIGVHYEG GGSHVAVSYG GVRLADGAWP AFYQGPRNVT VLVATAKGLG IRFSERLLGD IAAAGRLRSV PFDVDVKVPV
301: RLQVGGVRTW AVPVRVRCAV VVDRLAADAK VVSKSCRVKA RFLFWKD
101: APQPGTYVVQ MPKDKVFRVP PPENARLFQH YTRRARRRAR CSCARVCSWL LLALVLLAAA LAASAAVVYL VFKPRQPDYT LLSLAVSGLG GILGNASSTA
201: APAPVSFSPE FDATVRADNP NGKIGVHYEG GGSHVAVSYG GVRLADGAWP AFYQGPRNVT VLVATAKGLG IRFSERLLGD IAAAGRLRSV PFDVDVKVPV
301: RLQVGGVRTW AVPVRVRCAV VVDRLAADAK VVSKSCRVKA RFLFWKD
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.