Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G251100.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 65.09 | 43.82 |
| TraesCS3A01G336800.1 | Wheat | cytosol | 69.82 | 40.27 |
| TraesCS3D01G329800.1 | Wheat | cytosol | 67.46 | 37.13 |
| TraesCS3B01G367900.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome, plastid | 68.05 | 34.85 |
| HORVU6Hr1G013910.1 | Barley | mitochondrion | 73.37 | 33.07 |
| HORVU3Hr1G079540.2 | Barley | plastid | 71.01 | 30.46 |
| OQU87732 | Sorghum | cytosol | 52.66 | 30.17 |
| Zm00001d043128_P001 | Maize | cytosol | 49.11 | 28.04 |
| Os01t0812100-01 | Rice | cytosol, mitochondrion, peroxisome | 53.85 | 26.22 |
| Zm00001d028765_P001 | Maize | plastid | 46.15 | 25.0 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 34.32 | 21.97 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 33.14 | 20.9 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 35.5 | 19.61 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 28.4 | 18.75 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 28.4 | 18.46 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 28.4 | 18.46 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 27.81 | 18.36 |
| HORVU4Hr1G026770.2 | Barley | cytosol, plasma membrane | 32.54 | 18.21 |
| Solyc01g009160.2.1 | Tomato | plastid | 28.4 | 18.18 |
| PGSC0003DMT400022474 | Potato | plastid | 28.4 | 17.78 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 26.63 | 17.58 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 26.63 | 17.31 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 26.63 | 17.31 |
| HORVU5Hr1G052650.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 22.49 | 17.27 |
| KRH73453 | Soybean | plastid | 27.81 | 17.22 |
| KRH14686 | Soybean | plastid | 27.22 | 16.85 |
| PGSC0003DMT400005086 | Potato | plastid | 25.44 | 16.35 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 24.85 | 15.73 |
| HORVU4Hr1G018760.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 21.3 | 15.38 |
| AT5G21130.1 | Thale cress | cytosol | 24.26 | 14.59 |
| CDX70963 | Canola | cytosol | 25.44 | 14.24 |
| HORVU1Hr1G044080.1 | Barley | cytosol, endoplasmic reticulum, peroxisome | 21.89 | 14.23 |
| CDY09101 | Canola | cytosol | 24.26 | 13.99 |
| CDX88825 | Canola | cytosol | 24.85 | 13.91 |
| Bra006594.1-P | Field mustard | nucleus | 24.85 | 13.91 |
| CDY09100 | Canola | cytosol | 24.26 | 13.53 |
| HORVU2Hr1G119500.1 | Barley | peroxisome | 20.12 | 13.49 |
| Bra020148.1-P | Field mustard | cytosol | 23.08 | 13.31 |
| Bra020147.1-P | Field mustard | cytosol | 23.67 | 13.2 |
| HORVU4Hr1G018720.1 | Barley | cytosol | 2.96 | 3.21 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G058740.3 | EnsemblPlantsGene:HORVU5Hr1G058740 | InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF0 | PFAM:PF03168 |
| UniParc:UPI000B4859FD | UniProt:A0A287RDG8 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:457997056..457999496
Molecular Weight (calculated)
18121.8 Da
IEP (calculated)
9.576
GRAVY (calculated)
0.167
Length
169 amino acids
Sequence
(BLAST)
(BLAST)
001: KVGVHYDGAG SRVAVSYEGV SLADGAWPAF YQAPGNVTVF VARDKGAGIR FSERERGQMA AAERLKSVLF DVDITVPVRL QLGGVRTWAL PVTVRCAMAV
101: DSLAASAKVV SRSCDVKVVD SLAASAKVVS RSCDVKVPFL FWRNSSHVSY QCVRLSSYQL GCTGMPSRC
101: DSLAASAKVV SRSCDVKVVD SLAASAKVVS RSCDVKVPFL FWRNSSHVSY QCVRLSSYQL GCTGMPSRC
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.