Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0130400-01 | Rice | extracellular, peroxisome, vacuole | 67.61 | 69.57 |
| Os12t0127200-01 | Rice | extracellular, plasma membrane, vacuole | 66.9 | 69.09 |
| TraesCSU01G191800.1 | Wheat | cytosol, extracellular, plasma membrane | 64.08 | 66.91 |
| TraesCSU01G059700.1 | Wheat | cytosol, extracellular, plasma membrane | 64.08 | 66.91 |
| TraesCS4D01G124700.1 | Wheat | cytosol, extracellular, plasma membrane | 64.08 | 66.42 |
| TraesCS5A01G141200.1 | Wheat | cytosol, extracellular, peroxisome | 65.85 | 65.85 |
| TraesCS2A01G489300.1 | Wheat | cytosol, extracellular, plasma membrane | 60.92 | 65.28 |
| TraesCS5D01G151200.1 | Wheat | cytosol, extracellular, plasma membrane | 64.79 | 64.56 |
| TraesCS2A01G489400.1 | Wheat | cytosol, extracellular, plasma membrane | 60.56 | 64.42 |
| TraesCS5B01G139500.1 | Wheat | cytosol, extracellular, peroxisome | 64.08 | 64.31 |
| TraesCS4B01G128000.1 | Wheat | cytosol, extracellular, plasma membrane | 61.62 | 63.87 |
| HORVU0Hr1G010640.1 | Barley | cytosol, peroxisome | 64.44 | 59.8 |
| HORVU4Hr1G026770.2 | Barley | cytosol, plasma membrane | 63.03 | 59.27 |
| EES09185 | Sorghum | plastid | 80.99 | 58.08 |
| Zm00001d043128_P001 | Maize | cytosol | 43.66 | 41.89 |
| GSMUA_Achr11P... | Banana | cytosol, peroxisome, vacuole | 39.08 | 41.42 |
| VIT_06s0009g01620.t01 | Wine grape | plasma membrane, plastid | 37.68 | 40.07 |
| PGSC0003DMT400022474 | Potato | plastid | 37.32 | 39.26 |
| KRH14686 | Soybean | plastid | 36.97 | 38.46 |
| KRH73453 | Soybean | plastid | 35.92 | 37.36 |
| CDY48196 | Canola | cytosol, peroxisome, plasma membrane | 34.15 | 37.31 |
| Bra034321.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 34.15 | 37.31 |
| CDX77067 | Canola | cytosol, peroxisome, plasma membrane, plastid | 33.8 | 36.92 |
| PGSC0003DMT400005086 | Potato | plastid | 34.15 | 36.88 |
| Solyc01g009160.2.1 | Tomato | plastid | 34.15 | 36.74 |
| GSMUA_Achr3P03620_001 | Banana | cytosol, peroxisome, vacuole | 34.15 | 36.74 |
| AT2G27080.1 | Thale cress | cytosol, peroxisome, plasma membrane | 32.75 | 35.77 |
| Zm00001d013947_P001 | Maize | cytosol | 32.39 | 34.72 |
| CDX83252 | Canola | cytosol, peroxisome, plasma membrane | 30.28 | 33.59 |
| Bra000526.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 30.28 | 33.59 |
| Zm00001d032620_P001 | Maize | cytosol | 32.04 | 33.21 |
| Zm00001d001832_P001 | Maize | plastid | 29.23 | 33.07 |
| CDY38543 | Canola | cytosol, peroxisome, plasma membrane | 29.23 | 32.42 |
| Zm00001d028765_P001 | Maize | plastid | 35.21 | 32.05 |
| Bra020147.1-P | Field mustard | cytosol | 32.75 | 30.69 |
| CDY09101 | Canola | cytosol | 31.34 | 30.38 |
| CDY09100 | Canola | cytosol | 32.39 | 30.36 |
| Bra020148.1-P | Field mustard | cytosol | 30.99 | 30.03 |
| AT5G21130.1 | Thale cress | cytosol | 29.58 | 29.89 |
| Zm00001d005265_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid | 21.83 | 29.81 |
| CDX88825 | Canola | cytosol | 31.69 | 29.8 |
| Bra006594.1-P | Field mustard | nucleus | 30.99 | 29.14 |
| CDX70963 | Canola | cytosol | 30.63 | 28.81 |
Protein Annotations
| EnsemblPlants:Zm00001d005010_P001 | EnsemblPlants:Zm00001d005010_T001 | EnsemblPlantsGene:Zm00001d005010 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:LEA_2 | PANTHER:PTHR31852 | PANTHER:PTHR31852:SF42 | PFAM:PF03168 | ProteinID:ONM19965.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI00022203BB | UniProt:A0A1D6EIN3 | MapMan:35.1 | : | : |
Description
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Coordinates
chr2:+:153499579..153500433
Molecular Weight (calculated)
30656.0 Da
IEP (calculated)
11.839
GRAVY (calculated)
-0.167
Length
284 amino acids
Sequence
(BLAST)
(BLAST)
001: MADRVHPAPP PLPLSSTPPQ HPPTTETTPL QQHPSFARPP PPPPGTYIVQ VPKDQVLRVP PPDRARRYKK LAARPARRRA LRRACCCACA AAILAVLVAA
101: AFAGAVYLAY RPRAPTFSVT SLSIRGLDAA SLLRSSSSSS ETLSPRLDAA VRADNGRNAK VGVEYRGSGS VAVSYSGARL AAGPWPAFRQ PPRNVTAFAV
201: AMSGRGVRLT EDQATRIAAE QAAGAVPLQV ETTVPVRLRF GSVLRTWTVP VRARCDVSVD RLDGDAVVVN RGCRVRVRPL WWWW
101: AFAGAVYLAY RPRAPTFSVT SLSIRGLDAA SLLRSSSSSS ETLSPRLDAA VRADNGRNAK VGVEYRGSGS VAVSYSGARL AAGPWPAFRQ PPRNVTAFAV
201: AMSGRGVRLT EDQATRIAAE QAAGAVPLQV ETTVPVRLRF GSVLRTWTVP VRARCDVSVD RLDGDAVVVN RGCRVRVRPL WWWW
001: MAERVYPADS PPQSGQFSGN FSSGEFPKKP APPPSTYVIQ VPKDQIYRIP PPENAHRFEQ LSRKKTNRSN CRCCFCSFLA AVFILIVLAG ISFAVLYLIY
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
101: RPEAPKYSIE GFSVSGINLN STSPISPSFN VTVRSRNGNG KIGVYYEKES SVDVYYNDVD ISNGVMPVFY QPAKNVTVVK LVLSGSKIQL TSGMRKEMRN
201: EVSKKTVPFK LKIKAPVKIK FGSVKTWTMI VNVDCDVTVD KLTAPSRIVS RKCSHDVDLW
Arabidopsis Description
NHL13NDR1/HIN1-like protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVD2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.