Factsheet for TraesCS7A01G326400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

mitochondrion 4
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

golgi: 26860054

gfp PMID: 26860054 doi

MJ Hong, DY Kim, YW Seo

Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G227000.1	Wheat	mitochondrion	98.9	98.47
TraesCS7D01G323100.1	Wheat	mitochondrion	98.9	98.47
Os08t0103300-01	Rice	mitochondrion	83.77	84.7
KXG24166	Sorghum	cytosol	80.26	81.7
Zm00001d052765_P002	Maize	mitochondrion	78.29	78.29
TraesCS2A01G574000.1	Wheat	golgi	72.59	70.28
TraesCS1A01G273100.1	Wheat	mitochondrion	67.98	67.98
TraesCS3A01G378300.1	Wheat	mitochondrion	65.13	66.15
TraesCS4A01G209000.1	Wheat	cytosol, mitochondrion	63.82	66.14
TraesCS5A01G124100.1	Wheat	cytosol	61.62	64.01
TraesCS4A01G140800.1	Wheat	cytosol, plastid	48.03	54.48
TraesCS6A01G272800.1	Wheat	cytosol	49.78	52.91
TraesCS2A01G120900.1	Wheat	mitochondrion	43.42	52.66
TraesCS3A01G270800.1	Wheat	cytosol	38.6	49.58
TraesCS1A01G333900.1	Wheat	mitochondrion	40.13	49.06
TraesCS6A01G149400.1	Wheat	plastid	16.67	19.0

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF42	SUPFAM:SSF54518	SUPFAM:SSF81383
EnsemblPlantsGene:TraesCS7A01G326400	EnsemblPlants:TraesCS7A01G326400.1	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	SEG:seg

Description

No Description!

Coordinates

chr7A:-:474295969..474297884

Molecular Weight (calculated)

50638.3 Da

IEP (calculated)

9.777

GRAVY (calculated)

-0.413

Length

456 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RESFGSLSRR GFDVRISGLP GLSGHHHRGK SFGPPVEPHG GAVVADQNGW VGLPPELLRD VMKRLEEGES TWPSRKDVVA CAAVCSAWRE
101: ICKDIVQSPE FCGKLTFPVS LKQPGPRDGL IQCFIRRDKS TLTYYLYLCL SPAVLSENGK FLLAAKRNRR TTYTEYVISV DSKNISRSSN GYVGKMRSNF
201: LGTKFIVYDT QPPYNAGSLI PCQRGSRRIS SRRVSPKVPT GSYPIAQVNY ELNVLGTRGP RRMQCTMHSI PASAVDPDGV VPGQPQQLLP GPFDESFRST
301: NASSRFSMAD FSSSRFSSSR FSDVSGGLRR EEEDGDAKER PLVLRNKVPR WHEQLQCWCL NFRGRVTVAS VKNFQLTAAA PQVAAVPPSE PSQPPQQQQL
401: QPSSSLSSST SDHEKVILQF GKVTKDMFTM DYRYPLSAFQ AFAICLTSFD TKLACE

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.