Factsheet for TraesCS7D01G323100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G227000.1	Wheat	mitochondrion	99.34	99.34
TraesCS7A01G326400.1	Wheat	golgi	98.47	98.9
Os08t0103300-01	Rice	mitochondrion	83.84	85.14
KXG24166	Sorghum	cytosol	79.91	81.7
Zm00001d052765_P002	Maize	mitochondrion	78.17	78.51
TraesCS2D01G584900.1	Wheat	cytosol, mitochondrion	72.27	70.58
TraesCS1D01G273200.1	Wheat	mitochondrion	68.12	68.72
TraesCS3D01G371600.1	Wheat	mitochondrion	65.07	66.37
TraesCS4D01G110100.1	Wheat	golgi	63.54	66.14
TraesCS5D01G132000.1	Wheat	cytosol, mitochondrion	61.35	64.01
TraesCS4D01G164200.1	Wheat	cytosol, plastid	48.25	54.7
TraesCS2D01G122900.1	Wheat	cytosol	43.45	53.21
TraesCS6D01G252800.1	Wheat	cytosol	49.34	53.18
TraesCS3D01G270500.1	Wheat	cytosol	39.08	50.42
TraesCS1D01G336400.1	Wheat	mitochondrion	40.17	48.94
TraesCS6D01G138700.1	Wheat	plastid	16.59	19.49

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF42	SUPFAM:SSF54518	SUPFAM:SSF81383
EnsemblPlantsGene:TraesCS7D01G323100	EnsemblPlants:TraesCS7D01G323100.1	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	SEG:seg

Description

No Description!

Coordinates

chr7D:-:412885400..412887335

Molecular Weight (calculated)

50726.3 Da

IEP (calculated)

9.777

GRAVY (calculated)

-0.425

Length

458 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RESFGSLSRR GFDVRISGLP GLSGHHHRGK SFGPPGEPHG GAVVADQNGW VGLPPELLRD VMKRLEEGES TWPSRKDVVA CAAVCSAWRE
101: ICKDIVQSPE FCGKLTFPVS LKQPGPRDGL IQCFIRRDKS TLTYYLYLCL SPAVLSENGK FLLAAKRNRR TTYTEYVISV DSKNISRSSN GYVGKMRSNF
201: LGTKFIVYDT QPPYNAGSLV PCQRGSRRIS SRRVSPKVPT GSYPIAQVNY ELNVLGTRGP RRMQCTMHSI PASAVDPDGV VPGQPQQLLP GPFDESFRST
301: NASSRFSMAD FSSSRFSSSR FSDVSGGLRR EEEDGEAKER PLVLRNKVPR WHEQLQCWCL NFRGRVTVAS VKNFQLTAAA PQVAAAALPP SEPSQPPQQQ
401: QLQPSSSSSS STSDHEKVIL QFGKVTKDMF TMDYRYPLSA FQAFAICLTS FDTKLACE

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.