Factsheet for Zm00001d052765_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plastid 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24166	Sorghum	cytosol	89.91	91.52
Os08t0103300-01	Rice	mitochondrion	81.36	82.26
TraesCS7A01G326400.1	Wheat	golgi	78.29	78.29
TraesCS7B01G227000.1	Wheat	mitochondrion	78.51	78.17
TraesCS7D01G323100.1	Wheat	mitochondrion	78.51	78.17
Zm00001d002896_P001	Maize	cytosol	66.01	68.41
Zm00001d042724_P002	Maize	mitochondrion	64.25	61.04
Zm00001d053179_P001	Maize	cytosol	58.33	59.38
Zm00001d038310_P003	Maize	mitochondrion	64.47	59.04
Zm00001d029165_P004	Maize	cytosol, plastid	47.81	54.36
Zm00001d017773_P001	Maize	cytosol	47.37	49.43
Zm00001d011578_P003	Maize	nucleus	38.38	48.88
Zm00001d051568_P001	Maize	cytosol	46.49	48.62
Zm00001d038691_P001	Maize	mitochondrion	38.82	48.23
Zm00001d043895_P003	Maize	cytosol	37.5	45.24
Zm00001d007106_P001	Maize	cytosol	29.61	43.27
Zm00001d033948_P004	Maize	cytosol	10.53	26.52
Zm00001d015485_P001	Maize	plastid	18.2	20.65
Zm00001d029092_P001	Maize	mitochondrion	15.13	19.94
Zm00001d047019_P001	Maize	mitochondrion	15.13	19.94
Zm00001d039784_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	9.21	15.33

Protein Annotations

MapMan:15.5.21	ProteinID:AQK58025.1	EMBL:BT062252	UniProt:C0HIU6	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646
PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF42
SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000194877D
EnsemblPlantsGene:Zm00001d052765	EnsemblPlants:Zm00001d052765_P002	EnsemblPlants:Zm00001d052765_T002	SEG:seg	:	:

Description

TUB-transcription factor 7 TUB-transcription factor 7

Coordinates

chr4:+:200038358..200042350

Molecular Weight (calculated)

50807.2 Da

IEP (calculated)

9.204

GRAVY (calculated)

-0.451

Length

456 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RESFGSLSRR SLEVRISGLP GLSGGHHRGK SVGSVSDLRD RPVVVDQSRW VGLPPELLRD VMRRLEEGES NWPSRKNVVA CAAVCGTWRE
101: ICKDIVLSPE FCGKLTFPVS LKQPGPRNGI IQCFIKRDKS TSTYYLYLCL SPVVLSEDGK FLLAAKRNRR TTYTEYIISV DPKSISRSSD GCVGKMRSNF
201: LGTKFIVHDT RAPHNAGSLV SCERGSRRIS SRRVSPKVPT ASYPIARVNY ELNLLGTRGP RRMNCTMHSI PASTLDPQGM VPEPGQPKQI FVPGSSSFED
301: SFRSANNTPS SSRFSVADRS LDWSSSRFSE TSGLAQQDDD DSDQAKERPL VLCNKEPRWH EQLQCWCLNF HGRVTVASVK NFQLIAAPQL DSEPSQQAQQ
401: QTQPSNSSSA SDHDKVILQF GKVANDMFTM DYRYPLSAFQ AFAICLTSFD SKLACE

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.