Factsheet for Zm00001d038310_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19596	Sorghum	mitochondrion	77.11	85.33
Os05t0437900-01	Rice	mitochondrion	74.1	82.92
HORVU1Hr1G074940.3	Barley	cytosol, mitochondrion, nucleus, plastid	73.49	80.97
TraesCS1A01G273100.1	Wheat	mitochondrion	73.29	80.04
TraesCS1D01G273200.1	Wheat	mitochondrion	72.89	79.96
TraesCS1B01G282900.1	Wheat	mitochondrion	72.49	79.52
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	46.79	75.65
Zm00001d042724_P002	Maize	mitochondrion	67.27	69.79
Zm00001d002896_P001	Maize	cytosol	60.44	68.41
Zm00001d053179_P001	Maize	cytosol	60.04	66.74
Zm00001d052765_P002	Maize	mitochondrion	59.04	64.47
Zm00001d029165_P004	Maize	cytosol, plastid	48.19	59.85
Zm00001d011578_P003	Maize	nucleus	38.76	53.91
Zm00001d017773_P001	Maize	cytosol	46.18	52.63
Zm00001d051568_P001	Maize	cytosol	45.38	51.83
Zm00001d038691_P001	Maize	mitochondrion	37.55	50.95
Zm00001d043895_P003	Maize	cytosol	36.75	48.41
Zm00001d007106_P001	Maize	cytosol	29.92	47.76
Zm00001d033948_P004	Maize	cytosol	10.64	29.28
Zm00001d029092_P001	Maize	mitochondrion	15.46	22.25
Zm00001d047019_P001	Maize	mitochondrion	15.46	22.25
Zm00001d015485_P001	Maize	plastid	16.27	20.15
Zm00001d039784_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	9.24	16.79

Protein Annotations

EntrezGene:103630413	MapMan:15.5.21	Gene3D:3.20.90.10	UniProt:A0A096S4N1	ProteinID:AQK86320.1	ProteinID:AQK86321.1
ProteinID:AQK86323.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF31	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000220F357	EnsemblPlantsGene:Zm00001d038310	EnsemblPlants:Zm00001d038310_P003	EnsemblPlants:Zm00001d038310_T003
SEG:seg	:	:	:	:	:

Description

TUB-transcription factor 10Tubby-like F-box protein 10

Coordinates

chr6:+:154166434..154172068

Molecular Weight (calculated)

54405.7 Da

IEP (calculated)

10.244

GRAVY (calculated)

-0.430

Length

498 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RDSIGSLSRR NFEVTAAAAA GGLSGRTAAQ HRRGRSQSTV HELRDTRVVV QQDESRWASL PPELLRDVVR RLEASESAWP NRKHVVSCAA
101: VCRAWREMCR EIVLSPEVCG KLTFPVSLKQ PGPRDGMIQC FIKRDKSKST YRLYLCLSTA VLMENGKFLL SAKRSRRTTC TQYIISMDAD NISRSSSTYI
201: GKLRSNFLGT KFVVSDTQPP PYRYSGAAPP PPRAAGRRAS RRFDSRKVSP KVPAPGGAGG GSYSIAQVTY ELNVLGTRGP RRMHCVMRSI PASAVEPGGT
301: VPGQPERILP RALLEEEQEE EEEDSSFRRT GTGTGTTSFS KSSASIMDRS VDFGGGSSSS FRDFSSARFS DIVDGGGGDG GQDRERPLVL RNKAPRWHEQ
401: LQCWCLNFRG RVTIASVKNF QLIAAAPSLQ AQAPAAGAGA GAPPAPSSQP APQDQDKVIL QFGKVAKDMF TMDYRYPLSA FQAFAICLSS FDTKLACE

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.