Factsheet for TraesCS1A01G273100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G273200.1	Wheat	mitochondrion	98.68	99.12
TraesCS1B01G282900.1	Wheat	mitochondrion	97.59	98.02
HORVU1Hr1G074940.3	Barley	cytosol, mitochondrion, nucleus, plastid	95.18	96.02
Os05t0437900-01	Rice	mitochondrion	87.06	89.21
EES19596	Sorghum	mitochondrion	86.4	87.56
TraesCS3A01G378300.1	Wheat	mitochondrion	77.41	78.62
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	52.63	77.92
Zm00001d038310_P003	Maize	mitochondrion	80.04	73.29
TraesCS4A01G209000.1	Wheat	cytosol, mitochondrion	69.52	72.05
TraesCS5A01G124100.1	Wheat	cytosol	69.08	71.75
TraesCS7A01G326400.1	Wheat	golgi	67.98	67.98
TraesCS2A01G574000.1	Wheat	golgi	66.45	64.33
TraesCS4A01G140800.1	Wheat	cytosol, plastid	48.68	55.22
TraesCS2A01G120900.1	Wheat	mitochondrion	45.18	54.79
TraesCS6A01G272800.1	Wheat	cytosol	50.44	53.61
TraesCS3A01G270800.1	Wheat	cytosol	40.57	52.11
TraesCS1A01G333900.1	Wheat	mitochondrion	39.69	48.53
TraesCS6A01G149400.1	Wheat	plastid	15.79	18.0

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167
PRINTS:PR01573	ScanProsite:PS01200	PANTHER:PTHR16517	PANTHER:PTHR16517:SF39	SUPFAM:SSF54518	SUPFAM:SSF81383
EnsemblPlantsGene:TraesCS1A01G273100	EnsemblPlants:TraesCS1A01G273100.1	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	SEG:seg

Description

No Description!

Coordinates

chr1A:-:466927362..466929244

Molecular Weight (calculated)

50606.7 Da

IEP (calculated)

9.870

GRAVY (calculated)

-0.320

Length

456 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RDGFGSLSRR SFEVTISGLS GLTGHHRGKC QSTVHELRDA DLIVQESRWA SLPPELLSDV IRRLEASEST WPSRKHVVSC AAVCKAWREM
101: CREIVTSPEF CGKLTFPVSL KQPGPRDGMI QCFIKRDKSK STYHLYLCLT NAVLVENGKF LLSAKRIRRT TCTEYVISMD AENISRSSST YIGKLRSNFL
201: GTKFIVYDTQ PPYNGALVPP VGRSSRRFNS KKVSPKVPSG SYNIAQVSYE LNVLGTRGPR RMNCIMHSIP ASSVEPGGIV PGQPDQIMPR ALEDSFRSMS
301: SFSKSSIMDR STDFSSSRYF SSSRFLSDIA GGAAISRDED GEKERPLVLR NKVPRWHEQL QCWCLNFRGR VTIASVKNFQ LIAAPSQPPP PATGAGAPAP
401: APAPSQPAPA PEQDKIILQF GKVSKDMFTM DYRYPLSAFQ AFAMCLSSFD TKLACE

Best Arabidopsis Sequence Match ( AT1G43640.1 )
(BLAST)

001: MSFLSIVRDV RDTVGSFSRR SFDVRVSNGT THQRSKSHGV EAHIEDLIVI KNTRWANLPA ALLRDVMKKL DESESTWPAR KQVVACAGVC KTWRLMCKDI
101: VKSPEFSGKL TFPVSLKQPG PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI SRSSSTYIGK LKSNFLGTKF
201: IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV
301: NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM
401: FTMDYRYPLS AFQAFAISLS TFDTKLACE

Arabidopsis Description

TULP5Tubby-like F-box protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q944S3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.