Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G270500.1 | Wheat | cytosol | 98.31 | 98.31 |
| TraesCS3B01G304600.1 | Wheat | cytosol | 97.18 | 98.29 |
| HORVU3Hr1G061930.1 | Barley | cytosol | 94.93 | 94.66 |
| Os01t0674500-01 | Rice | cytosol | 91.27 | 91.01 |
| Zm00001d011578_P003 | Maize | nucleus | 85.07 | 84.36 |
| EES03425 | Sorghum | plastid | 85.35 | 84.17 |
| Zm00001d043895_P003 | Maize | cytosol | 81.13 | 76.19 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 66.76 | 74.06 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 66.2 | 73.9 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 65.35 | 72.73 |
| CDY02510 | Canola | cytosol | 63.38 | 70.09 |
| CDY25719 | Canola | cytosol | 63.66 | 68.48 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 69.01 | 63.8 |
| GSMUA_Achr10P... | Banana | mitochondrion | 66.2 | 63.51 |
| TraesCS1A01G333900.1 | Wheat | mitochondrion | 65.07 | 61.93 |
| KRH27356 | Soybean | mitochondrion | 65.63 | 61.64 |
| KRH21960 | Soybean | mitochondrion | 65.63 | 61.15 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 50.14 | 60.34 |
| AT1G53320.1 | Thale cress | mitochondrion | 63.66 | 59.63 |
| CDY25863 | Canola | cytosol, mitochondrion | 63.1 | 59.42 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 63.1 | 59.42 |
| CDY45927 | Canola | cytosol, plastid | 62.54 | 59.2 |
| Bra030942.1-P | Field mustard | mitochondrion | 65.07 | 58.93 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 65.63 | 58.1 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 62.54 | 57.51 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 62.54 | 57.51 |
| TraesCS2A01G120900.1 | Wheat | mitochondrion | 48.45 | 45.74 |
| TraesCS4A01G140800.1 | Wheat | cytosol, plastid | 50.7 | 44.78 |
| TraesCS1A01G273100.1 | Wheat | mitochondrion | 52.11 | 40.57 |
| TraesCS6A01G272800.1 | Wheat | cytosol | 49.01 | 40.56 |
| TraesCS3A01G378300.1 | Wheat | mitochondrion | 50.7 | 40.09 |
| TraesCS5A01G124100.1 | Wheat | cytosol | 49.01 | 39.64 |
| TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 49.01 | 39.55 |
| TraesCS7A01G326400.1 | Wheat | golgi | 49.58 | 38.6 |
| TraesCS2A01G574000.1 | Wheat | golgi | 49.86 | 37.58 |
| TraesCS6A01G149400.1 | Wheat | plastid | 16.34 | 14.5 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G270800.1 | EnsemblPlantsGene:TraesCS3A01G270800 | Gene3D:3.20.90.10 | InterPro:IPR025659 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| InterPro:Tubby_C_CS | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF35 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 |
| ScanProsite:PS01201 | SEG:seg | SUPFAM:SSF54518 | MapMan:15.5.21 | : | : |
Description
No Description!
Coordinates
chr3A:+:498229179..498235869
Molecular Weight (calculated)
40053.6 Da
IEP (calculated)
9.348
GRAVY (calculated)
-0.582
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MPREEPAAAE VSEVAEMGEE KEDGQPEEQE ERWARLLPEL LAEVVRRVEA SGGERWPARK DVVSCACVCR RWRDAAVAVV RPPAVSGKIT FPSSLKQPGP
101: REFPMQCFIK RNKKNSTFYL YLGLTTATVD KGKFLMAARR FRRGPHTEYI ISLDADDLSQ GSNAYMGKLR SDFWGTNFKV YDSKPPHDGA KASSSRSSRR
201: FGSRRISPQV SAGNYEVGQL SYKYNLLKSR GPRRMYCALE CASPQETWEN ALKTKFRKPM GTTVLRNKAP RWHEHLQCWC LNFHGRVTVA SVKNFQLSVA
301: ADPNDPAGSR DEETVLLQFG KVDDDIFTMD YRQPLSAFQA FAISLSSFGT KLACE
101: REFPMQCFIK RNKKNSTFYL YLGLTTATVD KGKFLMAARR FRRGPHTEYI ISLDADDLSQ GSNAYMGKLR SDFWGTNFKV YDSKPPHDGA KASSSRSSRR
201: FGSRRISPQV SAGNYEVGQL SYKYNLLKSR GPRRMYCALE CASPQETWEN ALKTKFRKPM GTTVLRNKAP RWHEHLQCWC LNFHGRVTVA SVKNFQLSVA
301: ADPNDPAGSR DEETVLLQFG KVDDDIFTMD YRQPLSAFQA FAISLSSFGT KLACE
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.