Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G270500.1 | Wheat | cytosol | 94.94 | 95.21 |
| TraesCS3B01G304600.1 | Wheat | cytosol | 93.82 | 95.16 |
| TraesCS3A01G270800.1 | Wheat | cytosol | 94.66 | 94.93 |
| Os01t0674500-01 | Rice | cytosol | 90.17 | 90.17 |
| EES03425 | Sorghum | plastid | 85.11 | 84.17 |
| Zm00001d011578_P003 | Maize | nucleus | 84.55 | 84.08 |
| Zm00001d043895_P003 | Maize | cytosol | 80.34 | 75.66 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 66.29 | 74.21 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 66.01 | 73.44 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 64.89 | 72.41 |
| CDY02510 | Canola | cytosol | 62.92 | 69.78 |
| CDY25719 | Canola | cytosol | 63.2 | 68.18 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 69.1 | 64.06 |
| GSMUA_Achr10P... | Banana | mitochondrion | 65.45 | 62.97 |
| KRH27356 | Soybean | mitochondrion | 64.61 | 60.85 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 50.0 | 60.34 |
| KRH21960 | Soybean | mitochondrion | 64.33 | 60.1 |
| CDY25863 | Canola | cytosol, mitochondrion | 62.64 | 59.15 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 62.64 | 59.15 |
| AT1G53320.1 | Thale cress | mitochondrion | 62.92 | 59.1 |
| CDY45927 | Canola | cytosol, plastid | 62.08 | 58.93 |
| Bra030942.1-P | Field mustard | mitochondrion | 64.61 | 58.67 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 64.61 | 57.36 |
| HORVU1Hr1G076900.1 | Barley | cytosol | 61.24 | 56.62 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 61.24 | 56.48 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 61.24 | 56.48 |
| HORVU5Hr1G023650.1 | Barley | plastid | 30.06 | 44.4 |
| HORVU1Hr1G074940.3 | Barley | cytosol, mitochondrion, nucleus, plastid | 52.81 | 41.59 |
| HORVU6Hr1G068970.3 | Barley | cytosol | 48.88 | 40.75 |
| HORVU4Hr1G020110.3 | Barley | cytosol, mitochondrion | 50.28 | 40.68 |
| HORVU5Hr1G040000.2 | Barley | cytosol | 49.72 | 40.32 |
| HORVU3Hr1G083290.1 | Barley | mitochondrion | 50.84 | 40.31 |
| HORVU0Hr1G001350.2 | Barley | cytosol | 32.58 | 31.1 |
| HORVU2Hr1G124880.1 | Barley | plastid | 51.4 | 29.47 |
| HORVU6Hr1G029710.3 | Barley | plastid | 20.79 | 18.73 |
Protein Annotations
| EMBL:AK365546 | EnsemblPlants:HORVU3Hr1G061930.1 | EnsemblPlantsGene:HORVU3Hr1G061930 | Gene3D:3.20.90.10 | InterPro:IPR025659 | InterPro:Tubby-like_C |
| InterPro:Tubby_C | InterPro:Tubby_C_CS | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF35 | PFAM:PF01167 | PRINTS:PR01573 |
| ScanProsite:PS01200 | ScanProsite:PS01201 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI0002006B5C | UniProt:F2DNS8 |
| MapMan:15.5.21 | : | : | : | : | : |
Description
Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:F2DNS8]
Coordinates
chrchr3H:-:472279099..472287622
Molecular Weight (calculated)
40120.5 Da
IEP (calculated)
9.339
GRAVY (calculated)
-0.621
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCEEPAAEG EVSEVAEMGE EKEDGQPEEQ EERWARLLPE LLSEVVRRVE ASGGERWPAR KDVVSCACVC RRWREAAVAV VRPPAVSGKI TFPSSLKQPG
101: PKEFPMQCFI KRNKKNSTFY LYLGLTTATV DKGKFLMAAR RFRRGPHTEY IISLDADDLS QGSNAYMGKL RSDFWGTNFK VYDSKPPHDG AKASSSRSSR
201: RFGSRRISPQ VSAGNYEVGQ LSYKYNLLKS RGPRRMYCAL EFPSTQESWE NSLKTKSRKP MGTKVLRNKA PRWHEHLQCW CLNFHGRVTV ASVKNFQLAA
301: ATDPNDPSSS RDEGTVLLQF GKVDDDIFTM DYRQPLSAFQ AFAISLSSFG TKLACE
101: PKEFPMQCFI KRNKKNSTFY LYLGLTTATV DKGKFLMAAR RFRRGPHTEY IISLDADDLS QGSNAYMGKL RSDFWGTNFK VYDSKPPHDG AKASSSRSSR
201: RFGSRRISPQ VSAGNYEVGQ LSYKYNLLKS RGPRRMYCAL EFPSTQESWE NSLKTKSRKP MGTKVLRNKA PRWHEHLQCW CLNFHGRVTV ASVKNFQLAA
301: ATDPNDPSSS RDEGTVLLQF GKVDDDIFTM DYRQPLSAFQ AFAISLSSFG TKLACE
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.