Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G270500.1 | Wheat | cytosol | 100.0 | 98.87 |
| TraesCS3A01G270800.1 | Wheat | cytosol | 98.29 | 97.18 |
| HORVU3Hr1G061930.1 | Barley | cytosol | 95.16 | 93.82 |
| Os01t0674500-01 | Rice | cytosol | 92.31 | 91.01 |
| Zm00001d011578_P003 | Maize | nucleus | 86.61 | 84.92 |
| EES03425 | Sorghum | plastid | 86.89 | 84.72 |
| Zm00001d043895_P003 | Maize | cytosol | 82.62 | 76.72 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 67.52 | 74.53 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 67.52 | 74.06 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 66.67 | 73.35 |
| CDY02510 | Canola | cytosol | 64.39 | 70.41 |
| CDY25719 | Canola | cytosol | 64.67 | 68.79 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 70.09 | 64.06 |
| GSMUA_Achr10P... | Banana | mitochondrion | 67.24 | 63.78 |
| TraesCS1B01G347200.1 | Wheat | mitochondrion | 65.81 | 61.93 |
| KRH27356 | Soybean | mitochondrion | 66.67 | 61.9 |
| KRH21960 | Soybean | mitochondrion | 66.67 | 61.42 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 51.28 | 61.02 |
| AT1G53320.1 | Thale cress | mitochondrion | 64.67 | 59.89 |
| CDY25863 | Canola | cytosol, mitochondrion | 64.1 | 59.68 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 64.1 | 59.68 |
| CDY45927 | Canola | cytosol, plastid | 63.53 | 59.47 |
| Bra030942.1-P | Field mustard | mitochondrion | 66.1 | 59.18 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 66.67 | 58.35 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 62.96 | 57.25 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 62.96 | 57.25 |
| TraesCS2B01G141800.1 | Wheat | cytosol | 49.57 | 46.03 |
| TraesCS4B01G166400.1 | Wheat | cytosol, plastid | 52.71 | 45.79 |
| TraesCS1B01G282900.1 | Wheat | mitochondrion | 53.56 | 41.41 |
| TraesCS6B01G300200.1 | Wheat | cytosol | 49.57 | 40.85 |
| TraesCS3B01G411000.1 | Wheat | mitochondrion | 52.14 | 40.67 |
| TraesCS5B01G123800.1 | Wheat | golgi | 50.14 | 40.09 |
| TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 49.86 | 39.77 |
| TraesCS7B01G227000.1 | Wheat | mitochondrion | 51.0 | 39.08 |
| TraesCS2B01G613800.1 | Wheat | mitochondrion, nucleus | 50.43 | 37.5 |
| TraesCS6B01G177300.1 | Wheat | plastid | 20.51 | 18.37 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G304600.1 | EnsemblPlantsGene:TraesCS3B01G304600 | Gene3D:3.20.90.10 | InterPro:IPR025659 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| InterPro:Tubby_C_CS | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF35 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 |
| ScanProsite:PS01201 | SEG:seg | SUPFAM:SSF54518 | MapMan:15.5.21 | : | : |
Description
No Description!
Coordinates
chr3B:+:489351968..489357486
Molecular Weight (calculated)
39709.1 Da
IEP (calculated)
9.601
GRAVY (calculated)
-0.634
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MPREEPPAAE VSETGEKEDG QPEEQEERWA RLLPELLSEV VRRVEASGGE RWPARKDVVS CACVCRRWRD AAVAVVRPPA VSGKITFPSS LKQPGPREFP
101: MQCFIKRNKK NSTFYLYLGL TTATVDKGKF LMAARRFRRG PHTEYIISLD ADDLSQGSNA YMGKLRSDFW GTNFKVYDSK PPHDGAKASS SRSSRRFGSR
201: RISPQVSAGN YEVGQLSYKY NLLKSRGPRR MYCALECPSP QETWENSLKT KFRKPMGTTV LRNKAPRWHE HLQCWCLNFH GRVTVASVKN FQLSVAADPN
301: DPTGSRDEET VLLQFGKVDD DIFTMDYRQP LSAFQAFAIS LSSFGTKLAC E
101: MQCFIKRNKK NSTFYLYLGL TTATVDKGKF LMAARRFRRG PHTEYIISLD ADDLSQGSNA YMGKLRSDFW GTNFKVYDSK PPHDGAKASS SRSSRRFGSR
201: RISPQVSAGN YEVGQLSYKY NLLKSRGPRR MYCALECPSP QETWENSLKT KFRKPMGTTV LRNKAPRWHE HLQCWCLNFH GRVTVASVKN FQLSVAADPN
301: DPTGSRDEET VLLQFGKVDD DIFTMDYRQP LSAFQAFAIS LSSFGTKLAC E
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.