Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 3
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
26860054
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G124100.1 | Wheat | cytosol | 99.09 | 99.09 |
TraesCS5D01G132000.1 | Wheat | cytosol, mitochondrion | 98.41 | 98.41 |
HORVU5Hr1G040000.2 | Barley | cytosol | 94.31 | 94.31 |
Os12t0163400-01 | Rice | cytosol | 87.24 | 86.07 |
KXG23034 | Sorghum | cytosol, mitochondrion | 84.05 | 84.44 |
TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 78.36 | 78.18 |
VIT_18s0072g00630.t01 | Wine grape | cytosol | 71.75 | 74.12 |
GSMUA_Achr9P08860_001 | Banana | cytosol, mitochondrion | 71.75 | 73.6 |
Solyc04g071440.2.1 | Tomato | mitochondrion | 70.84 | 73.0 |
PGSC0003DMT400061933 | Potato | cytosol | 70.61 | 72.77 |
KRH10476 | Soybean | cytosol, mitochondrion | 70.61 | 72.6 |
VIT_12s0055g00460.t01 | Wine grape | mitochondrion | 69.93 | 72.41 |
KRH43964 | Soybean | cytosol, mitochondrion | 70.16 | 72.13 |
PGSC0003DMT400076537 | Potato | cytosol | 69.48 | 71.43 |
Solyc01g104670.2.1 | Tomato | cytosol | 69.25 | 71.19 |
KRH35144 | Soybean | cytosol, mitochondrion | 69.7 | 71.16 |
KRG91652 | Soybean | cytosol, mitochondrion | 69.7 | 71.16 |
KRH08694 | Soybean | mitochondrion | 68.56 | 70.99 |
KRH70303 | Soybean | cytosol | 68.56 | 70.99 |
Solyc10g046970.1.1 | Tomato | mitochondrion | 68.34 | 70.42 |
PGSC0003DMT400002858 | Potato | mitochondrion | 67.65 | 69.72 |
TraesCS1B01G282900.1 | Wheat | mitochondrion | 71.07 | 68.72 |
TraesCS3B01G411000.1 | Wheat | mitochondrion | 68.56 | 66.89 |
CDY45959 | Canola | cytosol | 64.46 | 65.97 |
CDY13570 | Canola | cytosol | 63.55 | 65.65 |
CDX84977 | Canola | cytosol | 62.41 | 65.24 |
Bra040803.1-P | Field mustard | cytosol | 65.6 | 64.43 |
Bra024763.1-P | Field mustard | cytosol | 64.24 | 64.38 |
CDY36119 | Canola | cytosol | 61.73 | 64.22 |
CDY42119 | Canola | cytosol | 63.78 | 64.07 |
AT1G25280.1 | Thale cress | cytosol | 64.69 | 63.82 |
CDY51990 | Canola | cytosol | 61.05 | 63.36 |
Bra010985.1-P | Field mustard | cytosol | 63.33 | 63.33 |
AT1G76900.1 | Thale cress | cytosol | 65.38 | 63.08 |
CDY66464 | Canola | cytosol | 61.5 | 62.94 |
CDY72036 | Canola | cytosol | 63.33 | 62.75 |
Bra012486.1-P | Field mustard | cytosol | 63.33 | 62.75 |
TraesCS7B01G227000.1 | Wheat | mitochondrion | 64.46 | 61.79 |
CDY65845 | Canola | cytosol, mitochondrion | 63.1 | 61.56 |
CDX87562 | Canola | cytosol, mitochondrion | 62.87 | 61.2 |
Bra015711.1-P | Field mustard | cytosol, mitochondrion | 64.01 | 60.43 |
AT1G43640.1 | Thale cress | cytosol | 59.0 | 60.37 |
GSMUA_Achr11P... | Banana | cytosol | 54.44 | 57.59 |
TraesCS2B01G613800.1 | Wheat | mitochondrion, nucleus | 61.28 | 56.99 |
TraesCS4B01G166400.1 | Wheat | cytosol, plastid | 49.66 | 53.96 |
TraesCS6B01G300200.1 | Wheat | cytosol | 52.16 | 53.76 |
TraesCS2B01G141800.1 | Wheat | cytosol | 45.79 | 53.17 |
TraesCS3B01G304600.1 | Wheat | cytosol | 40.09 | 50.14 |
TraesCS1B01G347200.1 | Wheat | mitochondrion | 40.77 | 47.99 |
TraesCS6B01G177300.1 | Wheat | plastid | 19.82 | 22.19 |
Protein Annotations
Gene3D:1.20.1280.50 | MapMan:15.5.21 | Gene3D:3.20.90.10 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001810 | InterPro:IPR025659 | PFAM:PF00646 | PFAM:PF01167 |
PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF43 | SUPFAM:SSF54518 |
SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS5B01G123800 | EnsemblPlants:TraesCS5B01G123800.1 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:223124036..223126741
Molecular Weight (calculated)
48892.3 Da
IEP (calculated)
9.426
GRAVY (calculated)
-0.341
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRSIVRDV RDGFGSLSRR GFEVRFLGHR RGKSHSAVHE LHDPAPVIQS SCWANLPPEL LHDVIERLEA SEATWPSRKH VVACAAVCRT WREMCQEIVK
101: NPEFCGKITF PVSLKQPGPR DGTIQCFIKR DKSTQTYYLY LCLTSAVVAE NGKFLLLAKR HSRPTCTEYT IFMNTDNTSR SSNMYIGKLR SNLLGTKFVI
201: YDTQHPCNIP NVSQSGKTSR RFYSRKVSPK ASPSTYSIAQ VSYELNVLGT RGPRRMNCVM NSIPASSLVA GGTVLCQPDS AVAHSLDESF GSISFSKSSI
301: RDRSIRFSST RFSGISIGGS RNGGQALGDN DECKEWPLTL RNKAPRWHDQ LQCWCLNFKG RVTVASVKNF QLVAATESTA EAPTPSQPAP PPPSEHDKVI
401: LQFGKVANDM FTMDYRYPLS AFQAFAICLS SFDTKLACE
101: NPEFCGKITF PVSLKQPGPR DGTIQCFIKR DKSTQTYYLY LCLTSAVVAE NGKFLLLAKR HSRPTCTEYT IFMNTDNTSR SSNMYIGKLR SNLLGTKFVI
201: YDTQHPCNIP NVSQSGKTSR RFYSRKVSPK ASPSTYSIAQ VSYELNVLGT RGPRRMNCVM NSIPASSLVA GGTVLCQPDS AVAHSLDESF GSISFSKSSI
301: RDRSIRFSST RFSGISIGGS RNGGQALGDN DECKEWPLTL RNKAPRWHDQ LQCWCLNFKG RVTVASVKNF QLVAATESTA EAPTPSQPAP PPPSEHDKVI
401: LQFGKVANDM FTMDYRYPLS AFQAFAICLS SFDTKLACE
001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
Arabidopsis Description
TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.