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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 2
  • mitochondrion 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, nucleus
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
golgi: 26860054
gfp PMID: 26860054 doi
MJ Hong, DY Kim, YW Seo
Advanced Radiation Technology Institute, Korea Atomic Energy Research Institute.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G124100.1 Wheat cytosol 99.09 99.09
TraesCS5D01G132000.1 Wheat cytosol, mitochondrion 98.41 98.41
HORVU5Hr1G040000.2 Barley cytosol 94.31 94.31
Os12t0163400-01 Rice cytosol 87.24 86.07
KXG23034 Sorghum cytosol, mitochondrion 84.05 84.44
TraesCS4B01G112600.1 Wheat cytosol, mitochondrion 78.36 78.18
VIT_18s0072g00630.t01 Wine grape cytosol 71.75 74.12
GSMUA_Achr9P08860_001 Banana cytosol, mitochondrion 71.75 73.6
Solyc04g071440.2.1 Tomato mitochondrion 70.84 73.0
PGSC0003DMT400061933 Potato cytosol 70.61 72.77
KRH10476 Soybean cytosol, mitochondrion 70.61 72.6
VIT_12s0055g00460.t01 Wine grape mitochondrion 69.93 72.41
KRH43964 Soybean cytosol, mitochondrion 70.16 72.13
PGSC0003DMT400076537 Potato cytosol 69.48 71.43
Solyc01g104670.2.1 Tomato cytosol 69.25 71.19
KRH35144 Soybean cytosol, mitochondrion 69.7 71.16
KRG91652 Soybean cytosol, mitochondrion 69.7 71.16
KRH08694 Soybean mitochondrion 68.56 70.99
KRH70303 Soybean cytosol 68.56 70.99
Solyc10g046970.1.1 Tomato mitochondrion 68.34 70.42
PGSC0003DMT400002858 Potato mitochondrion 67.65 69.72
TraesCS1B01G282900.1 Wheat mitochondrion 71.07 68.72
TraesCS3B01G411000.1 Wheat mitochondrion 68.56 66.89
CDY45959 Canola cytosol 64.46 65.97
CDY13570 Canola cytosol 63.55 65.65
CDX84977 Canola cytosol 62.41 65.24
Bra040803.1-P Field mustard cytosol 65.6 64.43
Bra024763.1-P Field mustard cytosol 64.24 64.38
CDY36119 Canola cytosol 61.73 64.22
CDY42119 Canola cytosol 63.78 64.07
AT1G25280.1 Thale cress cytosol 64.69 63.82
CDY51990 Canola cytosol 61.05 63.36
Bra010985.1-P Field mustard cytosol 63.33 63.33
AT1G76900.1 Thale cress cytosol 65.38 63.08
CDY66464 Canola cytosol 61.5 62.94
CDY72036 Canola cytosol 63.33 62.75
Bra012486.1-P Field mustard cytosol 63.33 62.75
TraesCS7B01G227000.1 Wheat mitochondrion 64.46 61.79
CDY65845 Canola cytosol, mitochondrion 63.1 61.56
CDX87562 Canola cytosol, mitochondrion 62.87 61.2
Bra015711.1-P Field mustard cytosol, mitochondrion 64.01 60.43
AT1G43640.1 Thale cress cytosol 59.0 60.37
GSMUA_Achr11P... Banana cytosol 54.44 57.59
TraesCS2B01G613800.1 Wheat mitochondrion, nucleus 61.28 56.99
TraesCS4B01G166400.1 Wheat cytosol, plastid 49.66 53.96
TraesCS6B01G300200.1 Wheat cytosol 52.16 53.76
TraesCS2B01G141800.1 Wheat cytosol 45.79 53.17
TraesCS3B01G304600.1 Wheat cytosol 40.09 50.14
TraesCS1B01G347200.1 Wheat mitochondrion 40.77 47.99
TraesCS6B01G177300.1 Wheat plastid 19.82 22.19
Protein Annotations
Gene3D:1.20.1280.50MapMan:15.5.21Gene3D:3.20.90.10InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:IPR001810InterPro:IPR025659PFAM:PF00646PFAM:PF01167
PRINTS:PR01573ScanProsite:PS01200ScanProsite:PS01201PANTHER:PTHR16517PANTHER:PTHR16517:SF43SUPFAM:SSF54518
SUPFAM:SSF81383EnsemblPlantsGene:TraesCS5B01G123800EnsemblPlants:TraesCS5B01G123800.1InterPro:Tubby-like_CInterPro:Tubby_CInterPro:Tubby_C_CS
SEG:seg:::::
Description
No Description!
Coordinates
chr5B:-:223124036..223126741
Molecular Weight (calculated)
48892.3 Da
IEP (calculated)
9.426
GRAVY (calculated)
-0.341
Length
439 amino acids
Sequence
(BLAST)
001: MSFRSIVRDV RDGFGSLSRR GFEVRFLGHR RGKSHSAVHE LHDPAPVIQS SCWANLPPEL LHDVIERLEA SEATWPSRKH VVACAAVCRT WREMCQEIVK
101: NPEFCGKITF PVSLKQPGPR DGTIQCFIKR DKSTQTYYLY LCLTSAVVAE NGKFLLLAKR HSRPTCTEYT IFMNTDNTSR SSNMYIGKLR SNLLGTKFVI
201: YDTQHPCNIP NVSQSGKTSR RFYSRKVSPK ASPSTYSIAQ VSYELNVLGT RGPRRMNCVM NSIPASSLVA GGTVLCQPDS AVAHSLDESF GSISFSKSSI
301: RDRSIRFSST RFSGISIGGS RNGGQALGDN DECKEWPLTL RNKAPRWHDQ LQCWCLNFKG RVTVASVKNF QLVAATESTA EAPTPSQPAP PPPSEHDKVI
401: LQFGKVANDM FTMDYRYPLS AFQAFAICLS SFDTKLACE
Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)
001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
Arabidopsis Description
TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.