Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36119 | Canola | cytosol | 86.97 | 91.71 |
| Bra010985.1-P | Field mustard | cytosol | 89.66 | 90.89 |
| CDY51990 | Canola | cytosol | 86.29 | 90.78 |
| CDX84977 | Canola | cytosol | 85.39 | 90.48 |
| Bra012486.1-P | Field mustard | cytosol | 89.89 | 90.29 |
| CDY72036 | Canola | cytosol | 89.66 | 90.07 |
| CDY66464 | Canola | cytosol | 86.74 | 89.98 |
| Bra024763.1-P | Field mustard | cytosol | 87.64 | 89.04 |
| CDY42119 | Canola | cytosol | 86.52 | 88.1 |
| VIT_12s0055g00460.t01 | Wine grape | mitochondrion | 72.58 | 76.18 |
| KRH10476 | Soybean | cytosol, mitochondrion | 72.81 | 75.88 |
| KRH43964 | Soybean | cytosol, mitochondrion | 72.13 | 75.18 |
| Solyc10g046970.1.1 | Tomato | mitochondrion | 71.24 | 74.41 |
| PGSC0003DMT400002858 | Potato | mitochondrion | 71.01 | 74.18 |
| PGSC0003DMT400076537 | Potato | cytosol | 70.56 | 73.54 |
| Solyc01g104670.2.1 | Tomato | cytosol | 70.34 | 73.3 |
| HORVU5Hr1G023650.1 | Barley | plastid | 39.33 | 72.61 |
| GSMUA_Achr9P08860_001 | Banana | cytosol, mitochondrion | 67.19 | 69.86 |
| AT1G76900.1 | Thale cress | cytosol | 69.21 | 67.69 |
| Os12t0163400-01 | Rice | cytosol | 65.62 | 65.62 |
| TraesCS5A01G124100.1 | Wheat | cytosol | 64.49 | 65.38 |
| TraesCS5D01G132000.1 | Wheat | cytosol, mitochondrion | 64.27 | 65.15 |
| KXG23034 | Sorghum | cytosol, mitochondrion | 63.6 | 64.76 |
| TraesCS5B01G123800.1 | Wheat | golgi | 63.82 | 64.69 |
| AT1G43640.1 | Thale cress | cytosol | 61.8 | 64.1 |
| TraesCS4D01G110100.1 | Wheat | golgi | 63.37 | 64.09 |
| TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 63.15 | 63.86 |
| TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 62.92 | 63.64 |
| Zm00001d053179_P001 | Maize | cytosol | 61.8 | 61.38 |
| EES08030 | Sorghum | cytosol, mitochondrion | 61.35 | 59.87 |
| AT2G47900.3 | Thale cress | cytosol | 51.91 | 56.76 |
| AT2G18280.2 | Thale cress | cytosol | 49.21 | 55.58 |
| GSMUA_Achr11P... | Banana | cytosol | 51.69 | 55.42 |
| AT1G47270.1 | Thale cress | nucleus | 49.21 | 53.03 |
| AT3G06380.1 | Thale cress | mitochondrion | 44.49 | 52.11 |
| AT5G18680.1 | Thale cress | mitochondrion | 43.6 | 49.87 |
| AT1G53320.1 | Thale cress | mitochondrion | 41.35 | 48.55 |
| AT1G61940.2 | Thale cress | cytosol | 21.35 | 35.85 |
| AT1G16070.1 | Thale cress | nucleus | 18.43 | 20.65 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:15.5.21 | EntrezGene:839112 | UniProt:A0A178WGA3 | ProteinID:AAG28805.1 | ProteinID:AAN46223.1 |
| ProteinID:AAN46224.1 | ProteinID:AAN46225.1 | ProteinID:AAN46226.1 | ProteinID:AAN46227.1 | ProteinID:AAN46228.1 | ProteinID:AAN46229.1 |
| ProteinID:AAN46230.1 | ProteinID:AAN46231.1 | ProteinID:AAN46232.1 | ProteinID:AAN46233.1 | ProteinID:AEE30599.1 | EMBL:AF487271 |
| EMBL:AK317199 | ArrayExpress:AT1G25280 | EnsemblPlantsGene:AT1G25280 | RefSeq:AT1G25280 | TAIR:AT1G25280 | RefSeq:AT1G25280-TAIR-G |
| EnsemblPlants:AT1G25280.1 | TAIR:AT1G25280.1 | Unigene:At.23717 | Symbol:AtTLP10 | EMBL:BT001997 | EMBL:BT006290 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009620 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016567 | GO:GO:0019538 | GO:GO:0035091 | InterPro:IPR001810 |
| InterPro:IPR025659 | RefSeq:NP_001117353.1 | RefSeq:NP_173899.1 | RefSeq:NP_973909.1 | ProteinID:OAP16493.1 | PFAM:PF00646 |
| PFAM:PF01167 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF45 |
| UniProt:Q9FRH7 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS |
| UniParc:UPI00000A1436 | SEG:seg | : | : | : | : |
Description
TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
Coordinates
chr1:+:8863768..8866894
Molecular Weight (calculated)
50012.8 Da
IEP (calculated)
10.013
GRAVY (calculated)
-0.364
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.