Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH21016 | Soybean | cytosol | 16.6 | 44.0 |
| AT2G47900.3 | Thale cress | cytosol | 49.06 | 31.94 |
| KRH11270 | Soybean | cytosol | 40.75 | 28.05 |
| KRH50928 | Soybean | cytosol | 36.6 | 27.02 |
| PGSC0003DMT400027634 | Potato | cytosol | 38.11 | 26.03 |
| KRH02194 | Soybean | cytosol | 36.6 | 24.74 |
| AT5G18680.1 | Thale cress | mitochondrion | 35.09 | 23.91 |
| AT3G06380.1 | Thale cress | mitochondrion | 33.58 | 23.42 |
| KRH21017 | Soybean | mitochondrion | 24.91 | 22.76 |
| Solyc01g067680.2.1 | Tomato | cytosol | 21.13 | 22.49 |
| AT2G18280.2 | Thale cress | cytosol | 33.21 | 22.34 |
| AT1G25280.1 | Thale cress | cytosol | 35.85 | 21.35 |
| AT1G43640.1 | Thale cress | cytosol | 34.34 | 21.21 |
| AT1G47270.1 | Thale cress | nucleus | 32.83 | 21.07 |
| AT1G76900.1 | Thale cress | cytosol | 35.85 | 20.88 |
| AT1G53320.1 | Thale cress | mitochondrion | 29.81 | 20.84 |
| AT1G16070.1 | Thale cress | nucleus | 15.85 | 10.58 |
Protein Annotations
| MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:842489 | ProteinID:AAC28518.1 | ProteinID:AEE33905.1 | ProteinID:ANM58625.1 |
| ArrayExpress:AT1G61940 | EnsemblPlantsGene:AT1G61940 | RefSeq:AT1G61940 | TAIR:AT1G61940 | RefSeq:AT1G61940-TAIR-G | EnsemblPlants:AT1G61940.2 |
| Symbol:AtTLP4 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0035091 | InterPro:IPR001810 | InterPro:IPR025659 | RefSeq:NP_001321047.1 | RefSeq:NP_176385.2 |
| UniProt:O80699 | PFAM:PF00646 | PFAM:PF01167 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF73 | SUPFAM:SSF54518 |
| InterPro:Tubby-like_C | InterPro:Tubby_C | UniParc:UPI00000AA02A | : | : | : |
Description
TULP4Putative Tubby-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:O80699]
Coordinates
chr1:-:22897399..22898575
Molecular Weight (calculated)
30185.6 Da
IEP (calculated)
10.165
GRAVY (calculated)
-0.330
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPELLRDVL MRIERSEDTW PSRKNVVSCV GVCKNWRQIF KEIVNVPEVS SKFTFPISLK QPGPGGSLVQ CYVKRNRSNQ TFYLYLGGEA KIFCQSEPSE
101: PNKSIWKLSL KPGGTATTQT ELDNFVSFRS PSGQKEGVLV LKSKVPRLEE QSWCLDFNGW RDIVSSGKKF QLVALLRTNL RMKTTFSSLR KSETCTNSSY
201: EAEWIPLVRT SVFAVIARVC RDKKHTPSYE LKLALYFAKN SAILKKFVLR GYTREEDLLA LPVAN
101: PNKSIWKLSL KPGGTATTQT ELDNFVSFRS PSGQKEGVLV LKSKVPRLEE QSWCLDFNGW RDIVSSGKKF QLVALLRTNL RMKTTFSSLR KSETCTNSSY
201: EAEWIPLVRT SVFAVIARVC RDKKHTPSYE LKLALYFAKN SAILKKFVLR GYTREEDLLA LPVAN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.