Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU5Hr1G023650.1 | Barley | plastid | 38.93 | 69.29 |
GSMUA_Achr9P08860_001 | Banana | cytosol, mitochondrion | 65.03 | 65.19 |
AT1G76900.1 | Thale cress | cytosol | 67.37 | 63.52 |
KXG23034 | Sorghum | cytosol, mitochondrion | 63.87 | 62.7 |
AT1G25280.1 | Thale cress | cytosol | 64.1 | 61.8 |
Os12t0163400-01 | Rice | cytosol | 63.87 | 61.57 |
TraesCS4D01G110100.1 | Wheat | golgi | 62.94 | 61.36 |
TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 62.47 | 60.91 |
TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 62.47 | 60.91 |
TraesCS5A01G124100.1 | Wheat | cytosol | 60.84 | 59.45 |
TraesCS5D01G132000.1 | Wheat | cytosol, mitochondrion | 60.61 | 59.23 |
TraesCS5B01G123800.1 | Wheat | golgi | 60.37 | 59.0 |
Zm00001d053179_P001 | Maize | cytosol | 60.84 | 58.26 |
EES08030 | Sorghum | cytosol, mitochondrion | 60.14 | 56.58 |
AT2G47900.3 | Thale cress | cytosol | 51.98 | 54.79 |
GSMUA_Achr11P... | Banana | cytosol | 51.05 | 52.77 |
AT2G18280.2 | Thale cress | cytosol | 45.92 | 50.0 |
AT3G06380.1 | Thale cress | mitochondrion | 43.59 | 49.21 |
AT1G47270.1 | Thale cress | nucleus | 46.15 | 47.94 |
AT5G18680.1 | Thale cress | mitochondrion | 42.89 | 47.3 |
AT1G53320.1 | Thale cress | mitochondrion | 39.86 | 45.12 |
AT1G61940.2 | Thale cress | cytosol | 21.21 | 34.34 |
AT1G16070.1 | Thale cress | nucleus | 18.88 | 20.4 |
Protein Annotations
MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:840948 | ProteinID:AAD39275.1 | ProteinID:AEE31979.1 | EMBL:AF424565 |
ProteinID:ANM58299.1 | ArrayExpress:AT1G43640 | EnsemblPlantsGene:AT1G43640 | RefSeq:AT1G43640 | TAIR:AT1G43640 | RefSeq:AT1G43640-TAIR-G |
EnsemblPlants:AT1G43640.1 | TAIR:AT1G43640.1 | EMBL:AY046921 | EMBL:AY072154 | EMBL:AY122972 | Unigene:At.11339 |
Symbol:AtTLP5 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 |
GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009620 | GO:GO:0009987 | GO:GO:0035091 | InterPro:IPR001810 |
InterPro:IPR025659 | RefSeq:NP_001320745.1 | RefSeq:NP_564485.1 | PFAM:PF00646 | PFAM:PF01167 | PO:PO:0001185 |
PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009052 |
PRINTS:PR01573 | ScanProsite:PS01200 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF45 | UniProt:Q944S3 | SUPFAM:SSF54518 |
InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS | UniParc:UPI000009E0A9 | SEG:seg | : |
Description
TULP5Tubby-like F-box protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q944S3]
Coordinates
chr1:-:16439367..16441941
Molecular Weight (calculated)
47847.6 Da
IEP (calculated)
10.403
GRAVY (calculated)
-0.355
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFLSIVRDV RDTVGSFSRR SFDVRVSNGT THQRSKSHGV EAHIEDLIVI KNTRWANLPA ALLRDVMKKL DESESTWPAR KQVVACAGVC KTWRLMCKDI
101: VKSPEFSGKL TFPVSLKQPG PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI SRSSSTYIGK LKSNFLGTKF
201: IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV
301: NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM
401: FTMDYRYPLS AFQAFAISLS TFDTKLACE
101: VKSPEFSGKL TFPVSLKQPG PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI SRSSSTYIGK LKSNFLGTKF
201: IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV
301: NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM
401: FTMDYRYPLS AFQAFAISLS TFDTKLACE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.