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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU5Hr1G023650.1 Barley plastid 38.93 69.29
GSMUA_Achr9P08860_001 Banana cytosol, mitochondrion 65.03 65.19
AT1G76900.1 Thale cress cytosol 67.37 63.52
KXG23034 Sorghum cytosol, mitochondrion 63.87 62.7
AT1G25280.1 Thale cress cytosol 64.1 61.8
Os12t0163400-01 Rice cytosol 63.87 61.57
TraesCS4D01G110100.1 Wheat golgi 62.94 61.36
TraesCS4B01G112600.1 Wheat cytosol, mitochondrion 62.47 60.91
TraesCS4A01G209000.1 Wheat cytosol, mitochondrion 62.47 60.91
TraesCS5A01G124100.1 Wheat cytosol 60.84 59.45
TraesCS5D01G132000.1 Wheat cytosol, mitochondrion 60.61 59.23
TraesCS5B01G123800.1 Wheat golgi 60.37 59.0
Zm00001d053179_P001 Maize cytosol 60.84 58.26
EES08030 Sorghum cytosol, mitochondrion 60.14 56.58
AT2G47900.3 Thale cress cytosol 51.98 54.79
GSMUA_Achr11P... Banana cytosol 51.05 52.77
AT2G18280.2 Thale cress cytosol 45.92 50.0
AT3G06380.1 Thale cress mitochondrion 43.59 49.21
AT1G47270.1 Thale cress nucleus 46.15 47.94
AT5G18680.1 Thale cress mitochondrion 42.89 47.3
AT1G53320.1 Thale cress mitochondrion 39.86 45.12
AT1G61940.2 Thale cress cytosol 21.21 34.34
AT1G16070.1 Thale cress nucleus 18.88 20.4
Protein Annotations
MapMan:15.5.21Gene3D:3.20.90.10EntrezGene:840948ProteinID:AAD39275.1ProteinID:AEE31979.1EMBL:AF424565
ProteinID:ANM58299.1ArrayExpress:AT1G43640EnsemblPlantsGene:AT1G43640RefSeq:AT1G43640TAIR:AT1G43640RefSeq:AT1G43640-TAIR-G
EnsemblPlants:AT1G43640.1TAIR:AT1G43640.1EMBL:AY046921EMBL:AY072154EMBL:AY122972Unigene:At.11339
Symbol:AtTLP5InterPro:F-box_domGO:GO:0003674GO:GO:0003700GO:GO:0005488GO:GO:0005515
GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0008289GO:GO:0009058
GO:GO:0009605GO:GO:0009607GO:GO:0009620GO:GO:0009987GO:GO:0035091InterPro:IPR001810
InterPro:IPR025659RefSeq:NP_001320745.1RefSeq:NP_564485.1PFAM:PF00646PFAM:PF01167PO:PO:0001185
PO:PO:0007611PO:PO:0007616PO:PO:0009009PO:PO:0009031PO:PO:0009032PO:PO:0009052
PRINTS:PR01573ScanProsite:PS01200PANTHER:PTHR16517PANTHER:PTHR16517:SF45UniProt:Q944S3SUPFAM:SSF54518
InterPro:Tubby-like_CInterPro:Tubby_CInterPro:Tubby_C_CSUniParc:UPI000009E0A9SEG:seg:
Description
TULP5Tubby-like F-box protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q944S3]
Coordinates
chr1:-:16439367..16441941
Molecular Weight (calculated)
47847.6 Da
IEP (calculated)
10.403
GRAVY (calculated)
-0.355
Length
429 amino acids
Sequence
(BLAST)
001: MSFLSIVRDV RDTVGSFSRR SFDVRVSNGT THQRSKSHGV EAHIEDLIVI KNTRWANLPA ALLRDVMKKL DESESTWPAR KQVVACAGVC KTWRLMCKDI
101: VKSPEFSGKL TFPVSLKQPG PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI SRSSSTYIGK LKSNFLGTKF
201: IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV
301: NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM
401: FTMDYRYPLS AFQAFAISLS TFDTKLACE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.