Factsheet for GSMUA_Achr9P08860_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0072g00630.t01	Wine grape	cytosol	80.14	80.71
GSMUA_Achr8P32840_001	Banana	mitochondrion	77.34	80.54
GSMUA_Achr8P07950_001	Banana	mitochondrion	70.09	78.95
KRH10476	Soybean	cytosol, mitochondrion	78.74	78.92
KRH43964	Soybean	cytosol, mitochondrion	78.04	78.22
VIT_12s0055g00460.t01	Wine grape	mitochondrion	77.1	77.83
GSMUA_Achr3P22480_001	Banana	cytosol	62.85	77.3
KRH08694	Soybean	mitochondrion	75.23	75.94
Solyc10g046970.1.1	Tomato	mitochondrion	75.47	75.82
KRH70303	Soybean	cytosol	75.0	75.71
PGSC0003DMT400076537	Potato	cytosol	75.47	75.64
PGSC0003DMT400061933	Potato	cytosol	75.23	75.59
Solyc01g104670.2.1	Tomato	cytosol	75.23	75.41
PGSC0003DMT400002858	Potato	mitochondrion	75.0	75.35
Solyc04g071440.2.1	Tomato	mitochondrion	75.0	75.35
KRH35144	Soybean	cytosol, mitochondrion	75.7	75.35
KRG91652	Soybean	cytosol, mitochondrion	75.47	75.12
Os12t0163400-01	Rice	cytosol	77.8	74.83
KXG23034	Sorghum	cytosol, mitochondrion	76.17	74.6
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	53.5	74.35
TraesCS4A01G209000.1	Wheat	cytosol, mitochondrion	75.23	73.18
TraesCS4B01G112600.1	Wheat	cytosol, mitochondrion	75.23	73.18
TraesCS4D01G110100.1	Wheat	golgi	75.23	73.18
HORVU4Hr1G020110.3	Barley	cytosol, mitochondrion	75.0	72.95
HORVU5Hr1G040000.2	Barley	cytosol	74.07	72.21
TraesCS5A01G124100.1	Wheat	cytosol	73.6	71.75
TraesCS5B01G123800.1	Wheat	golgi	73.6	71.75
TraesCS5D01G132000.1	Wheat	cytosol, mitochondrion	73.36	71.53
CDY13570	Canola	cytosol	70.56	71.06
Zm00001d053179_P001	Maize	cytosol	74.07	70.76
CDY45959	Canola	cytosol	70.56	70.4
GSMUA_Achr2P23080_001	Banana	cytosol	21.96	69.12
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	28.74	69.1
Bra040803.1-P	Field mustard	cytosol	71.96	68.9
CDX84977	Canola	cytosol	66.82	68.1
EES08030	Sorghum	cytosol, mitochondrion	72.43	67.98
CDY51990	Canola	cytosol	67.06	67.85
CDY66464	Canola	cytosol	67.99	67.83
CDY36119	Canola	cytosol	66.82	67.77
Bra024763.1-P	Field mustard	cytosol	68.93	67.35
Bra012486.1-P	Field mustard	cytosol	69.63	67.27
CDY72036	Canola	cytosol	69.63	67.27
Bra010985.1-P	Field mustard	cytosol	68.93	67.2
AT1G25280.1	Thale cress	cytosol	69.86	67.19
CDY65845	Canola	cytosol, mitochondrion	70.33	66.89
CDY42119	Canola	cytosol	68.22	66.82
AT1G76900.1	Thale cress	cytosol	70.79	66.59
CDX87562	Canola	cytosol, mitochondrion	69.86	66.3
GSMUA_Achr11P...	Banana	cytosol	64.02	66.02
AT1G43640.1	Thale cress	cytosol	65.19	65.03
Bra015711.1-P	Field mustard	cytosol, mitochondrion	70.56	64.95
GSMUA_Achr1P11290_001	Banana	cytosol	56.78	59.85
GSMUA_Achr3P17440_001	Banana	cytosol	55.61	59.06
GSMUA_Achr6P09030_001	Banana	cytosol	47.43	56.08
GSMUA_Achr7P25250_001	Banana	cytosol	41.12	55.35
GSMUA_Achr4P01150_001	Banana	cytosol	40.65	54.55
GSMUA_Achr2P22940_001	Banana	cytosol	45.33	52.86
GSMUA_Achr3P31460_001	Banana	cytosol	39.02	52.19
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	34.58	49.83
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	34.35	49.83
GSMUA_Achr10P...	Banana	mitochondrion	41.12	47.57
GSMUA_Achr4P10540_001	Banana	mitochondrion	42.29	47.14
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	18.93	41.12
GSMUA_Achr10P...	Banana	nucleus	17.76	36.19
GSMUA_Achr1P10180_001	Banana	cytosol, mitochondrion, nucleus, plastid	19.63	22.89

Protein Annotations

MapMan:15.5.21	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr9G08860_001	EnsemblPlants:GSMUA_Achr9P08860_001	EnsemblPlants:GSMUA_Achr9T08860_001	InterPro:IPR001810	InterPro:IPR025659	UniProt:M0TYP5
PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517
PANTHER:PTHR16517:SF43	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS
UniParc:UPI000295C79A	:	:	:	:	:

Description

Tubby-like F-box protein 14 [Source:GMGC_GENE;Acc:GSMUA_Achr9G08860_001]

Coordinates

chr9:+:5704362..5709280

Molecular Weight (calculated)

47642.1 Da

IEP (calculated)

9.601

GRAVY (calculated)

-0.292

Length

428 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RDSFGSLSRR GFEARLSGHH RGKSQGAVHE VLDQCLVVQD SCWASLPPEL LRDVITRLEA SESTWPSRTN VVVCAGVCRS WREMCKEIVK
101: SPEFSGKLTF PVSLKQPGPR DGSIQCFIKR DKSALTYHLY LSVLVENGKF LLSAKRIRRA TCTEYIISTN ACKITRSSNT YIGKLRSNFL GTKFVMYDTQ
201: PPYNGTASSQ PGKISQRFYS RKVSPKVPTG SYNVAQVTYE LNVLGTRGPR RMHCVMHSIP ASALDAGGTV PGQPENLLPR SLEDSFRSIS FAKSSIMDQS
301: MDVSSSHFSD ITGGARVADA EDDEAKERPL ILRNKAPRWH EQLQCWCLNF RGRVTVASVK NFQLIAAIQP SAGVPTPSQS VPPEHDKVIL QFGKVAKDMF
401: TMDYRYPLSA FQAFAICLSS FDTKLACE

Best Arabidopsis Sequence Match ( AT1G76900.2 )
(BLAST)

001: MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK
101: EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
201: KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
301: TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
401: TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP1Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WI43]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.