Factsheet for GSMUA_Achr3P31460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25250_001	Banana	cytosol	86.88	87.42
GSMUA_Achr4P01150_001	Banana	cytosol	82.19	82.45
CDY02510	Canola	cytosol	71.88	71.65
GSMUA_Achr4P10540_001	Banana	mitochondrion	85.0	70.83
CDY25719	Canola	cytosol	72.19	70.0
TraesCS3B01G304600.1	Wheat	cytosol	74.06	67.52
Os01t0674500-01	Rice	cytosol	74.69	67.13
GSMUA_Achr10P...	Banana	mitochondrion	77.5	67.03
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	61.56	66.78
TraesCS3A01G270800.1	Wheat	cytosol	74.06	66.76
TraesCS3D01G270500.1	Wheat	cytosol	74.06	66.76
Zm00001d011578_P003	Maize	nucleus	74.38	66.48
Os05t0560400-00	Rice	cytosol	72.81	66.19
EES03425	Sorghum	plastid	74.38	66.11
HORVU3Hr1G061930.1	Barley	cytosol	73.44	66.01
KRH27356	Soybean	mitochondrion	76.25	64.55
KRH21960	Soybean	mitochondrion	76.25	64.04
Os05t0514300-01	Rice	mitochondrion	73.44	63.17
AT1G53320.1	Thale cress	mitochondrion	73.12	61.74
Zm00001d038691_P001	Maize	mitochondrion	70.62	61.58
EES18499	Sorghum	mitochondrion	71.56	61.56
CDY45927	Canola	cytosol, plastid	71.88	61.33
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	34.06	61.24
CDY25863	Canola	cytosol, mitochondrion	71.88	61.01
Bra041095.1-P	Field mustard	cytosol, mitochondrion	71.88	61.01
TraesCS1A01G333900.1	Wheat	mitochondrion	70.0	60.05
TraesCS1B01G347200.1	Wheat	mitochondrion	69.69	59.79
TraesCS1D01G336400.1	Wheat	mitochondrion	70.0	59.57
VIT_19s0014g01250.t01	Wine grape	mitochondrion	74.38	59.35
Bra030942.1-P	Field mustard	mitochondrion	72.19	58.93
Solyc07g062390.2.1	Tomato	mitochondrion	70.31	58.29
PGSC0003DMT400018209	Potato	mitochondrion	70.31	58.29
Zm00001d043895_P003	Maize	cytosol	68.75	58.2
HORVU1Hr1G076900.1	Barley	cytosol	68.44	56.88
OQU78419	Sorghum	cytosol	66.88	56.76
Os01t0759100-01	Rice	cytosol, plastid	61.25	53.26
GSMUA_Achr2P23080_001	Banana	cytosol	22.19	52.21
GSMUA_Achr8P07950_001	Banana	mitochondrion	56.25	47.37
GSMUA_Achr6P09030_001	Banana	cytosol	51.88	45.86
GSMUA_Achr1P11290_001	Banana	cytosol	55.31	43.6
GSMUA_Achr2P22940_001	Banana	cytosol	49.69	43.32
GSMUA_Achr3P22480_001	Banana	cytosol	46.56	42.82
GSMUA_Achr3P17440_001	Banana	cytosol	53.75	42.68
GSMUA_Achr8P32840_001	Banana	mitochondrion	54.69	42.58
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	40.62	42.21
GSMUA_Achr9P08860_001	Banana	cytosol, mitochondrion	52.19	39.02
GSMUA_Achr11P...	Banana	cytosol	48.12	37.11
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	32.5	35.02
HORVU0Hr1G001350.2	Barley	cytosol	39.06	33.51
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	15.62	25.38
GSMUA_Achr10P...	Banana	nucleus	14.69	22.38
GSMUA_Achr1P10180_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.31	17.71

Protein Annotations

EnsemblPlants:GSMUA_Achr3P31460_001	EnsemblPlants:GSMUA_Achr3T31460_001	EnsemblPlantsGene:GSMUA_Achr3G31460_001	Gene3D:3.20.90.10	InterPro:IPR025659	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	PANTHER:PTHR16517	PANTHER:PTHR16517:SF50	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	SEG:seg	SUPFAM:SSF54518	UniParc:UPI00029679BE	UniProt:M0SJG0
MapMan:15.5.21	:	:	:	:	:

Description

Tubby-like F-box protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr3G31460_001]

Coordinates

chr3:-:29771539..29775430

Molecular Weight (calculated)

35547.6 Da

IEP (calculated)

9.888

GRAVY (calculated)

-0.289

Length

320 amino acids

Sequence
(BLAST)

001: MLPELIAEIV RRVEAGGERW PLRKDVVSCA CVCRRWREVT RGVVRPPLET GNITFPSSLK EPGPADTPIQ CYIKRNKKNS TFYLYLGLSQ TFTDKGKFLL
101: VARRFRHGAL TEYIISLDVD GLSQGSNAYV GKLRSDFLGT NFTIYDSRPP YGGAKASSSR ASRRFASKQI SPQVPAGNFE IGQISYKFNL LKSRGPRRMH
201: CTLQCPTALD STEENPLKSK AHSAGASVVL RNKAPRWHEH LQCWCLNFHG RVTVASVKNF QLVATADANH PSGIGDGETV LLQFGKVGDD MFTVDYRQPL
301: SAFQAFAICL TSFGTKFACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.