Factsheet for Os05t0560400-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0674500-01	Rice	cytosol	78.69	77.81
GSMUA_Achr7P25250_001	Banana	cytosol	65.91	72.96
GSMUA_Achr3P31460_001	Banana	cytosol	66.19	72.81
GSMUA_Achr4P01150_001	Banana	cytosol	64.77	71.47
CDY02510	Canola	cytosol	61.08	66.98
OQU78419	Sorghum	cytosol	71.31	66.58
CDY25719	Canola	cytosol	61.08	65.15
Os05t0514300-01	Rice	mitochondrion	65.62	62.1
GSMUA_Achr4P10540_001	Banana	mitochondrion	67.05	61.46
GSMUA_Achr10P...	Banana	mitochondrion	63.35	60.27
KRH27356	Soybean	mitochondrion	63.64	59.26
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	49.43	58.98
KRH21960	Soybean	mitochondrion	63.64	58.79
AT1G53320.1	Thale cress	mitochondrion	61.93	57.52
CDY25863	Canola	cytosol, mitochondrion	61.08	57.03
Bra041095.1-P	Field mustard	cytosol, mitochondrion	61.08	57.03
CDY45927	Canola	cytosol, plastid	60.51	56.8
Bra030942.1-P	Field mustard	mitochondrion	63.07	56.63
PGSC0003DMT400018209	Potato	mitochondrion	61.36	55.96
Solyc07g062390.2.1	Tomato	mitochondrion	61.36	55.96
VIT_19s0014g01250.t01	Wine grape	mitochondrion	62.22	54.61
Os01t0759100-01	Rice	cytosol, plastid	56.82	54.35
Os03t0351400-01	Rice	cytosol	39.77	47.3
Os07t0667000-01	Rice	cytosol	51.7	44.83
Os02t0705300-01	Rice	cytosol	51.14	42.06
Os05t0437900-01	Rice	mitochondrion	52.56	41.57
Os12t0163400-01	Rice	cytosol	49.72	39.33
Os01t0866800-01	Rice	mitochondrion	50.0	39.29
Os08t0103300-01	Rice	mitochondrion	49.72	38.8
Os04t0687900-01	Rice	cytosol	50.85	38.74
Os11t0163600-01	Rice	cytosol, mitochondrion	11.65	24.4
Os03t0348500-00	Rice	extracellular	8.81	18.34
Os02t0179400-00	Rice	nucleus	12.22	10.41

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:4339597	ProteinID:AAU10642.1	ProteinID:BAF18222.2	ProteinID:BAS95313.1
EMBL:CM000142	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289
GO:GO:0035091	InterPro:IPR025659	EnsemblPlantsGene:Os05g0560400	EnsemblPlants:Os05t0560400-00	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF35	UniProt:Q688Y7	SUPFAM:SSF54518
SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000042AB97	RefSeq:XP_015639807.1
SEG:seg	:	:	:	:	:

Description

tubby-like protein 11, tubby-like protein 10, F-box protein 278Tubby family protein. (Os05t0560400-00)

Coordinates

chr5:+:27892619..27895727

Molecular Weight (calculated)

39681.2 Da

IEP (calculated)

9.294

GRAVY (calculated)

-0.508

Length

352 amino acids

Sequence
(BLAST)

001: MAAVREPREE AAVGEGEGEE EGRWGGLLPE LVEEVVRRVE ASGGERWPAR KDLVSCACVC RRWREAAAAV VRPLPESGRI TFPSSLKQPG PKDFPIQCFV
101: KRNKKKSMFY LYLGLLNGTM DKGKFLMAAR RFRRGPHTEY VISLDADDLS QGSNAYVGKL RSDFWGTNFK IYDNQPPYDD AKTSSTRSSQ RFGSTHRFGS
201: RRICPQISAG NFNVGQISYK YNLLKSRGPR RMFCTMECPS TQETWENSLK TKSLRCTGTT VLRNKAPRWH EHLQCWCLNF HGRVTVASVK NFQLVATADP
301: SHPDSVGDEE TVILQFGKVD SNIFTMDYRQ PLSAFQAFAI CLSSFGTKLA CE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.