Factsheet for Os08t0103300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24166	Sorghum	cytosol	84.92	85.49
TraesCS7D01G323100.1	Wheat	mitochondrion	85.14	83.84
TraesCS7B01G227000.1	Wheat	mitochondrion	85.14	83.84
TraesCS7A01G326400.1	Wheat	golgi	84.7	83.77
Zm00001d052765_P002	Maize	mitochondrion	82.26	81.36
Os04t0687900-01	Rice	cytosol	76.94	75.11
Os05t0437900-01	Rice	mitochondrion	68.51	69.44
Os01t0866800-01	Rice	mitochondrion	66.08	66.52
Os12t0163400-01	Rice	cytosol	64.75	65.62
Os03t0351400-01	Rice	cytosol	37.69	57.43
Os11t0163600-01	Rice	cytosol, mitochondrion	21.29	57.14
Os07t0667000-01	Rice	cytosol	48.12	53.45
Os02t0705300-01	Rice	cytosol	49.89	52.57
Os05t0560400-00	Rice	cytosol	38.8	49.72
Os05t0514300-01	Rice	mitochondrion	40.8	49.46
Os01t0674500-01	Rice	cytosol	38.8	49.16
Os01t0759100-01	Rice	cytosol, plastid	36.14	44.29
Os03t0348500-00	Rice	extracellular	9.53	25.44
Os02t0179400-00	Rice	nucleus	11.97	13.08

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:4344429	EMBL:AK120706	ProteinID:BAD33172.1
ProteinID:BAF22685.1	ProteinID:BAT03421.1	ncoils:Coil	ProteinID:EEE67897.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810
InterPro:IPR025659	EnsemblPlantsGene:Os08g0103300	EnsemblPlants:Os08t0103300-01	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF42	UniProt:Q69U54	SUPFAM:SSF54518
SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00002260A3	RefSeq:XP_015650083.1
RefSeq:XP_015650084.1	RefSeq:XP_015650085.1	RefSeq:XP_015650086.1	SEG:seg	:	:

Description

tubby-like protein 2, tubby-like protein 12, F-box protein 402Similar to Tubby-like protein 3. (Os08t0103300-01);Similar to Tubby-like F-box protein 12. (Os08t0103300-02)

Coordinates

chr8:+:187111..191782

Molecular Weight (calculated)

50531.3 Da

IEP (calculated)

9.867

GRAVY (calculated)

-0.457

Length

451 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RDSFGSLSRR SFEVRISGLP GLSGHHRGKS LGSLSELRDR PVVVDQSRWV GLPPELLRDV MKRLEEGESN WPSRKDVVAC AAVCRTWREI
101: CKDIVQSPEI CGKLTFPVSL KQPGPRDGLI QCFIKRDKSK LTYYLYLCLS PAVLSENGKF LLAAKRNRRA TSTEYIISVD SKNISRSSNG YVGKMRSNFL
201: GTKFVVYDTQ PPYNAGSLMS CQHGSRRISS RRVSPKLPTG SYPIAHVKYE LNVLGTRGPR RMQCTMHSIP ASAVDPEGVV PGQPEQLLPG PFEESFRSTN
301: TSSRFSFMDR SLDFSSSRFS EISGSANQQG EDDIPEAKER PLVLRNKVPR WHEQLQCWCL NFRGRVTVAS VKNFQLIAAA SSESSQLEQQ QQQQQQNHAS
401: SSSSASDHGK VILQFGKVGK DMFTMDYRYP LSAFQAFAIC LTSFDTKLAC E

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.