Factsheet for Os07t0667000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0351400-01	Rice	cytosol	56.9	78.04
VIT_01s0010g01060.t01	Wine grape	mitochondrion	10.1	75.93
TraesCS2D01G122900.1	Wheat	cytosol	68.97	74.87
TraesCS2B01G141800.1	Wheat	cytosol	68.97	74.07
TraesCS2A01G120900.1	Wheat	mitochondrion	67.98	73.4
EER97690	Sorghum	cytosol	67.73	68.92
GSMUA_Achr1P11290_001	Banana	cytosol	67.24	67.24
VIT_07s0104g01290.t01	Wine grape	cytosol	66.5	66.67
GSMUA_Achr3P17440_001	Banana	cytosol	65.76	66.25
PGSC0003DMT400029513	Potato	cytosol	63.3	64.9
Solyc09g074510.2.1	Tomato	cytosol	62.56	64.14
CDY27467	Canola	cytosol	61.08	62.47
AT2G47900.3	Thale cress	cytosol	62.56	62.41
KRH71532	Soybean	cytosol	61.08	62.0
Bra021446.1-P	Field mustard	cytosol	61.33	61.94
CDY55525	Canola	cytosol	61.33	61.94
Zm00001d007106_P001	Maize	cytosol	47.54	61.86
Os01t0674500-01	Rice	cytosol	46.8	53.37
Os05t0514300-01	Rice	mitochondrion	47.54	51.88
Os05t0560400-00	Rice	cytosol	44.83	51.7
Os12t0163400-01	Rice	cytosol	54.68	49.89
Os05t0437900-01	Rice	mitochondrion	54.68	49.89
Os02t0705300-01	Rice	cytosol	51.48	48.83
Os08t0103300-01	Rice	mitochondrion	53.45	48.12
Os04t0687900-01	Rice	cytosol	53.94	47.4
Os01t0866800-01	Rice	mitochondrion	51.97	47.1
Os01t0759100-01	Rice	cytosol, plastid	42.36	46.74
VIT_01s0010g01050.t01	Wine grape	cytosol	14.29	42.96
Os11t0163600-01	Rice	cytosol, mitochondrion	17.24	41.67
VIT_00s0426g00050.t01	Wine grape	extracellular	15.27	38.99
Os03t0348500-00	Rice	extracellular	13.3	31.95
Zm00001d029092_P001	Maize	mitochondrion	25.12	29.48
Zm00001d047019_P001	Maize	mitochondrion	25.12	29.48
Zm00001d039784_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	14.29	21.17
Os02t0179400-00	Rice	nucleus	11.08	10.9

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:4344218	EMBL:AK060587	EMBL:AK071159
ProteinID:BAC20077.1	ProteinID:BAF22486.1	ProteinID:BAT03110.1	ProteinID:EEE67772.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810
InterPro:IPR025659	EnsemblPlantsGene:Os07g0667000	EnsemblPlants:Os07t0667000-01	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF36	UniProt:Q8H485	SUPFAM:SSF54518
SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00000AD721	RefSeq:XP_015644710.1
SEG:seg	:	:	:	:	:

Description

tubby-like protein 7, tubby-like protein 11, F-box protein 398Similar to Tubby-like protein 3. (Os07t0667000-01);Similar to Tubby-like protein 3. (Os07t0667000-02)

Coordinates

chr7:+:28173219..28176820

Molecular Weight (calculated)

45457.3 Da

IEP (calculated)

9.359

GRAVY (calculated)

-0.346

Length

406 amino acids

Sequence
(BLAST)

001: MSFRSVIQEV KGEIGAISRR GFRSRPGRVR RVAAAAEEPP DESSAAALVM RESCWTQLPP ELLREVLARV EESEGWWPRR RDVVACAGVC RSWRGIVREI
101: VRTPEASGNL TFPISLKQPG PRDAPMKCFI VRNRTTQTYY LYIGLTDALT DDGKFLLAAR KCRRTTCTEY LISLDMNDIS KRTDSYVGKL RSNFLGTKFT
201: IYDAHPPYAG DVISKGQSAR VIGSNHLSPR IPAGNYPVSH ISYELNVLGS RGPRRMHCAM DSIPVSAIEQ GGTAPTQTEF PLSYHESFTS IPFFKSKSVR
301: ANNSTASLLT QNGSKLVLKN KSPRWHEHLQ CWCLNFHGRV TVASVKNFQL VASDESNPTN QEHDDVILQF GKVGKDMFTM DYRYPISAFQ AFAICLSSFD
401: TKIACE

Best Arabidopsis Sequence Match ( AT2G47900.1 )
(BLAST)

001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG SNTYIGKLRS NFLGTKFTVY
201: DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301: SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD
401: TKIACE

Arabidopsis Description

AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.