Factsheet for Os02t0705300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G300200.1	Wheat	cytosol	89.25	89.67
TraesCS6D01G252800.1	Wheat	cytosol	88.78	89.41
HORVU6Hr1G068970.3	Barley	cytosol	88.55	88.76
TraesCS6A01G272800.1	Wheat	cytosol	88.55	88.34
EES07397	Sorghum	cytosol	88.08	87.07
Zm00001d017773_P001	Maize	cytosol	87.85	86.04
Zm00001d051568_P001	Maize	cytosol	87.15	85.55
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	33.41	80.34
GSMUA_Achr2P23080_001	Banana	cytosol	24.53	77.21
GSMUA_Achr6P09030_001	Banana	cytosol	63.08	74.59
GSMUA_Achr2P22940_001	Banana	cytosol	58.41	68.12
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	42.76	61.62
Os03t0351400-01	Rice	cytosol	41.12	59.46
Os05t0437900-01	Rice	mitochondrion	54.91	52.81
Os12t0163400-01	Rice	cytosol	54.91	52.81
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	24.07	52.28
Os07t0667000-01	Rice	cytosol	48.83	51.48
Os01t0866800-01	Rice	mitochondrion	53.74	51.34
Os05t0560400-00	Rice	cytosol	42.06	51.14
Os08t0103300-01	Rice	mitochondrion	52.57	49.89
Os01t0674500-01	Rice	cytosol	41.36	49.72
Os05t0514300-01	Rice	mitochondrion	42.99	49.46
Os11t0163600-01	Rice	cytosol, mitochondrion	18.93	48.21
Os04t0687900-01	Rice	cytosol	51.64	47.84
Os01t0759100-01	Rice	cytosol, plastid	39.02	45.38
GSMUA_Achr10P...	Banana	nucleus	21.96	44.76
Zm00001d033948_P004	Maize	cytosol	16.36	38.67
Os03t0348500-00	Rice	extracellular	10.75	27.22
Os02t0179400-00	Rice	nucleus	12.38	12.83

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:4330460	EMBL:AK064855	ProteinID:BAD08037.1
ProteinID:BAF09780.2	ProteinID:BAS80512.1	ProteinID:BAS80514.1	EMBL:CM000139	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810
InterPro:IPR025659	EnsemblPlantsGene:Os02g0705300	EnsemblPlants:Os02t0705300-01	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF75	UniProt:Q6Z2G9	SUPFAM:SSF54518
SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI0000236898	RefSeq:XP_015627455.1
SEG:seg	:	:	:	:	:

Description

tubby-like protein 8, tubby-like protein 5, F-box protein 107Tubby-like protein 2. (Os02t0705300-01);Similar to cDNA clone:J013000H10, full insert sequence. (Os02t0705300-02);Tubby family protein. (Os02t0705300-03);Similar to cDNA clone:J013000H10, full insert sequence. (Os02t0705300-04)

Coordinates

chr2:+:29108515..29112062

Molecular Weight (calculated)

47763.5 Da

IEP (calculated)

10.030

GRAVY (calculated)

-0.357

Length

428 amino acids

Sequence
(BLAST)

001: MSLKSIVREL REMRDGIGSM SRRAADGRAG GGRGGSRHSW PVLWSEQQQP PQQQQLQRQE HQQQQGRWAN LPPELLLDVI QRVEASEATW PARRQVVACA
101: AVCRSWREVT KEVVKTLEEC GRITFPISLK QPGPREHPVQ CFVRRDRATS TYLLYLGLSP SLHGENDKLL LAARKIRRAT RTSFVISLVS NDFSLSSSTY
201: VGKLKPNFLG TKFTIFDSQP PCDAVVLPNN RPSKRHFKQV SPRLPLGNYN VATVSYELTV LRNRGPRRMQ CTMHSIPALC IQEGGKAPTP TGIIHSLDEQ
301: VPALSTSKGK EPAIEFSSTS LSADLSGPVC TNEVPLVLKN KAPRWHEQLQ CWCLNFRGRV TVASVKNFQL VASVDPSLGI PAAEQEKVIL QFGKIGKDIF
401: TMDYRYPLSA FQAFAICLTS FDTKPACE

Best Arabidopsis Sequence Match ( AT2G18280.2 )
(BLAST)

001: MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS LPPELLHDII WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG

Arabidopsis Description

TULP2Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.