Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- nucleus 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0163400-01 | Rice | cytosol | 66.07 | 24.94 |
| Os05t0437900-01 | Rice | mitochondrion | 60.71 | 22.92 |
| Os08t0103300-01 | Rice | mitochondrion | 57.14 | 21.29 |
| Os04t0687900-01 | Rice | cytosol | 55.36 | 20.13 |
| Os01t0866800-01 | Rice | mitochondrion | 52.98 | 19.87 |
| Os02t0705300-01 | Rice | cytosol | 48.21 | 18.93 |
| Os07t0667000-01 | Rice | cytosol | 41.67 | 17.24 |
| Os05t0514300-01 | Rice | mitochondrion | 29.17 | 13.17 |
| Os01t0674500-01 | Rice | cytosol | 26.79 | 12.64 |
| Os01t0759100-01 | Rice | cytosol, plastid | 27.38 | 12.5 |
| Os05t0560400-00 | Rice | cytosol | 24.4 | 11.65 |
| Os03t0351400-01 | Rice | cytosol | 12.5 | 7.09 |
| Os03t0348500-00 | Rice | extracellular | 5.95 | 5.92 |
| Os02t0179400-00 | Rice | nucleus | 12.5 | 5.08 |
Protein Annotations
| EnsemblPlants:Os11t0163600-01 | EnsemblPlantsGene:Os11g0163600 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf | PANTHER:PTHR16517 |
| PANTHER:PTHR16517:SF43 | PFAM:PF00646 | ProteinID:BAT12817.1 | SEG:seg | SUPFAM:SSF81383 | UniParc:UPI0003939D0C |
| UniProt:A0A0P0XZ63 | MapMan:15.5.21 | : | : | : | : |
Description
tubby-like protein 6, tubby-like protein 13, F-box protein 569Similar to Tubby-like F-box protein 13. (Os11t0163600-01)
Coordinates
chr11:+:3098464..3102645
Molecular Weight (calculated)
18901.2 Da
IEP (calculated)
8.421
GRAVY (calculated)
-0.091
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRSIVRDV RDGFGSLSRR GFEVRILGHR RGKSHGAVHE LHDPVPVIQS SCWASLPPEL LRDIIERLEE SEATWPSRKH VVACAGVCRT WREMCKEIVK
101: NPELCGKITF PISLSLGHEM ELCSVSLGGI SLRRPTICTS LLALLCLLTM ANSFYQQKET GMQHVQNM
101: NPELCGKITF PISLSLGHEM ELCSVSLGGI SLRRPTICTS LLALLCLLTM ANSFYQQKET GMQHVQNM
001: MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK
101: EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
201: KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
301: TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
401: TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT KLACE
101: EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
201: KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
301: TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
401: TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT KLACE
Arabidopsis Description
TULP1Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WI43]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.