Factsheet for Os05t0514300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18499	Sorghum	mitochondrion	85.22	85.22
Zm00001d038691_P001	Maize	mitochondrion	83.87	85.01
TraesCS1A01G333900.1	Wheat	mitochondrion	84.41	84.18
TraesCS1B01G347200.1	Wheat	mitochondrion	84.41	84.18
TraesCS1D01G336400.1	Wheat	mitochondrion	83.87	82.98
HORVU1Hr1G076900.1	Barley	cytosol	78.49	75.84
GSMUA_Achr7P25250_001	Banana	cytosol	63.44	74.21
GSMUA_Achr3P31460_001	Banana	cytosol	63.17	73.44
GSMUA_Achr4P01150_001	Banana	cytosol	62.1	72.41
Os01t0674500-01	Rice	cytosol	66.4	69.38
CDY02510	Canola	cytosol	58.06	67.29
CDY25719	Canola	cytosol	58.33	65.76
Os05t0560400-00	Rice	cytosol	62.1	65.62
GSMUA_Achr4P10540_001	Banana	mitochondrion	66.4	64.32
KRH21960	Soybean	mitochondrion	64.52	62.99
KRH27356	Soybean	mitochondrion	63.98	62.96
Os01t0759100-01	Rice	cytosol, plastid	62.1	62.77
GSMUA_Achr10P...	Banana	mitochondrion	61.83	62.16
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	48.12	60.68
AT1G53320.1	Thale cress	mitochondrion	61.56	60.42
CDY25863	Canola	cytosol, mitochondrion	60.75	59.95
Bra041095.1-P	Field mustard	cytosol, mitochondrion	60.75	59.95
CDY45927	Canola	cytosol, plastid	60.22	59.73
Solyc07g062390.2.1	Tomato	mitochondrion	61.56	59.33
VIT_19s0014g01250.t01	Wine grape	mitochondrion	63.71	59.1
Bra030942.1-P	Field mustard	mitochondrion	61.83	58.67
PGSC0003DMT400018209	Potato	mitochondrion	60.75	58.55
Os03t0351400-01	Rice	cytosol	40.32	50.68
Os07t0667000-01	Rice	cytosol	51.88	47.54
Os02t0705300-01	Rice	cytosol	49.46	42.99
Os05t0437900-01	Rice	mitochondrion	50.81	42.47
Os04t0687900-01	Rice	cytosol	51.08	41.13
Os12t0163400-01	Rice	cytosol	49.19	41.12
Os08t0103300-01	Rice	mitochondrion	49.46	40.8
Os01t0866800-01	Rice	mitochondrion	48.92	40.62
Os11t0163600-01	Rice	cytosol, mitochondrion	13.17	29.17
Os03t0348500-00	Rice	extracellular	7.53	16.57
Os02t0179400-00	Rice	nucleus	12.37	11.14

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	EntrezGene:4339307	ProteinID:AAU03104.1	EMBL:AK061747
ProteinID:BAF17947.1	ProteinID:BAS94873.1	ProteinID:EEE64348.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810	InterPro:IPR025659
EnsemblPlantsGene:Os05g0514300	EnsemblPlants:Os05t0514300-01	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32	UniProt:Q68Y48	SUPFAM:SSF54518	SUPFAM:SSF81383
InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00004259CA	RefSeq:XP_015638758.1	SEG:seg

Description

tubby-like protein 10, tubby-like protein 9, F-box protein 267Similar to Tubby-like protein 3. (Os05t0514300-01);Similar to Tubby-like protein 3. (Os05t0514300-02)

Coordinates

chr5:+:25497335..25501606

Molecular Weight (calculated)

41460.2 Da

IEP (calculated)

8.810

GRAVY (calculated)

-0.425

Length

372 amino acids

Sequence
(BLAST)

001: MALWRCSSSW LSSVSRSSGG VGGGESKVSP EIAPVSGGEG EGEEEEGEEE RWSRLLPELL TEIMRRVDAG AERWPPRRDV VACACVCRRW RDAAVSVVRP
101: PLECGRITFP SSLKQPGPRD APMHCFIRRN KKNSTFYLYL SLTQALTDKG KFLLAARRFR NGAHTEYIIS YDCDDLFPGS NSYVGKLRSD FLGTKFIIYD
201: SQPPYDGAKP SRSQSSRRFA SKQINPNVSG GNYEVGQVSY KFNFLKSRGP RRMQCNIQCP VGQSTASDPL KKLISTSSPL ALRNKAPRWH EHLQCWCLNF
301: HGRVTVASVK NFQLVAPAGT SDPWGIADEE TVILQFGKIE DDAFTMDYRQ PLSAFQAFAI CLTSFGTKLA CE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.