Factsheet for TraesCS1B01G347200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G333900.1	Wheat	mitochondrion	97.32	97.32
TraesCS1D01G336400.1	Wheat	mitochondrion	97.32	96.54
Os05t0514300-01	Rice	mitochondrion	84.18	84.41
HORVU1Hr1G076900.1	Barley	cytosol	86.33	83.64
Zm00001d038691_P001	Maize	mitochondrion	81.5	82.83
EES18499	Sorghum	mitochondrion	82.57	82.8
GSMUA_Achr7P25250_001	Banana	cytosol	60.59	71.07
GSMUA_Achr4P01150_001	Banana	cytosol	60.05	70.22
GSMUA_Achr3P31460_001	Banana	cytosol	59.79	69.69
TraesCS3B01G304600.1	Wheat	cytosol	61.93	65.81
CDY02510	Canola	cytosol	55.5	64.49
CDY25719	Canola	cytosol	55.76	63.03
GSMUA_Achr4P10540_001	Banana	mitochondrion	63.27	61.46
KRH27356	Soybean	mitochondrion	61.13	60.32
KRH21960	Soybean	mitochondrion	61.39	60.1
GSMUA_Achr10P...	Banana	mitochondrion	59.52	60.0
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	47.19	59.66
AT1G53320.1	Thale cress	mitochondrion	58.45	57.52
Bra041095.1-P	Field mustard	cytosol, mitochondrion	57.91	57.29
CDY25863	Canola	cytosol, mitochondrion	57.91	57.29
CDY45927	Canola	cytosol, plastid	57.37	57.07
Solyc07g062390.2.1	Tomato	mitochondrion	58.45	56.48
PGSC0003DMT400018209	Potato	mitochondrion	58.45	56.48
VIT_19s0014g01250.t01	Wine grape	mitochondrion	60.59	56.36
Bra030942.1-P	Field mustard	mitochondrion	58.71	55.87
TraesCS2B01G141800.1	Wheat	cytosol	45.84	45.24
TraesCS4B01G166400.1	Wheat	cytosol, plastid	48.26	44.55
TraesCS6B01G300200.1	Wheat	cytosol	50.13	43.9
TraesCS5B01G123800.1	Wheat	golgi	47.99	40.77
TraesCS3B01G411000.1	Wheat	mitochondrion	48.53	40.22
TraesCS7B01G227000.1	Wheat	mitochondrion	49.06	39.96
TraesCS1B01G282900.1	Wheat	mitochondrion	48.26	39.65
TraesCS4B01G112600.1	Wheat	cytosol, mitochondrion	46.11	39.09
TraesCS2B01G613800.1	Wheat	mitochondrion, nucleus	47.45	37.5
TraesCS6B01G177300.1	Wheat	plastid	20.64	19.64

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32	SUPFAM:SSF54518	SUPFAM:SSF81383
EnsemblPlantsGene:TraesCS1B01G347200	EnsemblPlants:TraesCS1B01G347200.1	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	SEG:seg

Description

No Description!

Coordinates

chr1B:+:576214717..576219272

Molecular Weight (calculated)

41734.4 Da

IEP (calculated)

9.163

GRAVY (calculated)

-0.510

Length

373 amino acids

Sequence
(BLAST)

001: MALWRRSSSW LTSCSRAPAG IGGGNEAKVS PEVAPEEARE EDRRAEAEDE ERWSRLLPEL LTDIVRRVDA GAERWPPRRD VVACACVCRR WRDAAVSVVR
101: PPLECGRITF PSSLKQPGPR DAPMHCFIRR NKSTSTFYLY LSLTQALTDK GKFLLAARRF RHGAHTEYII SYDSDDLYPG SNSGVGKLRS DFLGTKFLMY
201: DNQKPYDGAK SLKSRSSRRF ASKQISPLSG DNLEVGQVSY RFNFLKSRGP RRMHCSIQCP VGQGTASDPS KEKPPSTSSS LSLKNKAPRW HDHLQCWCLN
301: FHGRVTVASV KNFQLVAPAG TSDPWGVGDE ETVILQFGKI EDDAFTMDFR HPLSAYQAFA ICLTSFGTKL ACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.