Factsheet for Zm00001d038691_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18499	Sorghum	mitochondrion	96.73	95.43
Os05t0514300-01	Rice	mitochondrion	85.01	83.87
TraesCS1B01G347200.1	Wheat	mitochondrion	82.83	81.5
TraesCS1A01G333900.1	Wheat	mitochondrion	82.83	81.5
TraesCS1D01G336400.1	Wheat	mitochondrion	82.29	80.32
HORVU1Hr1G076900.1	Barley	cytosol	76.84	73.25
GSMUA_Achr7P25250_001	Banana	cytosol	62.67	72.33
GSMUA_Achr3P31460_001	Banana	cytosol	61.58	70.62
GSMUA_Achr4P01150_001	Banana	cytosol	60.49	69.59
CDY02510	Canola	cytosol	57.77	66.04
Zm00001d011578_P003	Maize	nucleus	63.22	64.8
CDY25719	Canola	cytosol	58.04	64.55
GSMUA_Achr4P10540_001	Banana	mitochondrion	64.85	61.98
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	49.05	61.02
KRH27356	Soybean	mitochondrion	62.4	60.58
GSMUA_Achr10P...	Banana	mitochondrion	61.04	60.54
KRH21960	Soybean	mitochondrion	62.4	60.1
Zm00001d043895_P003	Maize	cytosol	61.31	59.52
Solyc07g062390.2.1	Tomato	mitochondrion	61.85	58.81
AT1G53320.1	Thale cress	mitochondrion	60.49	58.58
PGSC0003DMT400018209	Potato	mitochondrion	61.58	58.55
CDY25863	Canola	cytosol, mitochondrion	59.67	58.09
Bra041095.1-P	Field mustard	cytosol, mitochondrion	59.67	58.09
CDY45927	Canola	cytosol, plastid	59.13	57.87
VIT_19s0014g01250.t01	Wine grape	mitochondrion	63.22	57.86
Bra030942.1-P	Field mustard	mitochondrion	61.04	57.14
Zm00001d029165_P004	Maize	cytosol, plastid	50.14	45.89
Zm00001d002896_P001	Maize	cytosol	50.68	42.27
Zm00001d017773_P001	Maize	cytosol	48.77	40.96
Zm00001d051568_P001	Maize	cytosol	48.5	40.83
Zm00001d053179_P001	Maize	cytosol	47.41	38.84
Zm00001d052765_P002	Maize	mitochondrion	48.23	38.82
Zm00001d038310_P003	Maize	mitochondrion	50.95	37.55
Zm00001d007106_P001	Maize	cytosol	31.06	36.54
Zm00001d042724_P002	Maize	mitochondrion	46.87	35.83
Zm00001d033948_P004	Maize	cytosol	12.53	25.41
Zm00001d015485_P001	Maize	plastid	19.62	17.91
Zm00001d029092_P001	Maize	mitochondrion	16.62	17.63
Zm00001d047019_P001	Maize	mitochondrion	16.62	17.63
Zm00001d039784_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	8.72	11.68

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100273081	MapMan:15.5.21	Gene3D:3.20.90.10	ProteinID:AQK87580.1	UniProt:B4FSQ3
EMBL:BT040141	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00017B78D7	EnsemblPlantsGene:Zm00001d038691	EnsemblPlants:Zm00001d038691_P001	EnsemblPlants:Zm00001d038691_T001
SEG:seg	:	:	:	:	:

Description

TUB-transcription factor 5Tubby-like F-box protein 7

Coordinates

chr6:+:162624149..162628635

Molecular Weight (calculated)

41060.7 Da

IEP (calculated)

9.554

GRAVY (calculated)

-0.483

Length

367 amino acids

Sequence
(BLAST)

001: MVSWRRSASW LSSASRSSLG TAVGGEAKVT PEADPAAQHD EADEERWSRL LPELLTEIMR RVDAGAERWP PRRDVVVCAC VCRRWRDAAV SVVRPPLECG
101: RITFPSSLKQ PGPRDAPMHC FIRRDKKNST FSLYLSLTQA LTDKGKFLLA ARRFRQGAHT EYIISYDYDD LHPRSSSYVG KLRSDFLGTK FIIYDSQAPY
201: DGAKPSRTRS TRRFASKQIS PQVSGGNFEV GQVTYRFNFM KSRGPRRMQC NIQCPVGQGS ASDPSKEKTP SPSSLDLKNK APRWHDHLQC WCLNFHGRVT
301: VASVKNFQLV ATAGSGGPWG VGDEETVILQ FGKIEDDAFT MDYRQPLSAF QAFAICLTSF GTKLACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.