Factsheet for TraesCS1D01G336400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G333900.1	Wheat	mitochondrion	97.61	98.39
TraesCS1B01G347200.1	Wheat	mitochondrion	96.54	97.32
HORVU1Hr1G076900.1	Barley	cytosol	86.17	84.16
Os05t0514300-01	Rice	mitochondrion	82.98	83.87
Zm00001d038691_P001	Maize	mitochondrion	80.32	82.29
EES18499	Sorghum	mitochondrion	81.12	81.99
GSMUA_Achr7P25250_001	Banana	cytosol	60.37	71.38
GSMUA_Achr4P01150_001	Banana	cytosol	60.11	70.85
GSMUA_Achr3P31460_001	Banana	cytosol	59.57	70.0
TraesCS3D01G270500.1	Wheat	cytosol	61.44	65.07
CDY02510	Canola	cytosol	55.32	64.8
CDY25719	Canola	cytosol	55.59	63.33
GSMUA_Achr4P10540_001	Banana	mitochondrion	62.77	61.46
KRH27356	Soybean	mitochondrion	61.17	60.85
KRH21960	Soybean	mitochondrion	61.44	60.63
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	46.81	59.66
GSMUA_Achr10P...	Banana	mitochondrion	58.51	59.46
AT1G53320.1	Thale cress	mitochondrion	58.24	57.78
VIT_19s0014g01250.t01	Wine grape	mitochondrion	61.44	57.61
Bra041095.1-P	Field mustard	cytosol, mitochondrion	57.71	57.56
CDY25863	Canola	cytosol, mitochondrion	57.71	57.56
CDY45927	Canola	cytosol, plastid	57.18	57.33
Solyc07g062390.2.1	Tomato	mitochondrion	57.98	56.48
PGSC0003DMT400018209	Potato	mitochondrion	57.98	56.48
Bra030942.1-P	Field mustard	mitochondrion	58.78	56.38
TraesCS2D01G122900.1	Wheat	cytosol	45.21	45.45
TraesCS4D01G164200.1	Wheat	cytosol, plastid	48.14	44.8
TraesCS6D01G252800.1	Wheat	cytosol	48.94	43.29
TraesCS7D01G323100.1	Wheat	mitochondrion	48.94	40.17
TraesCS5D01G132000.1	Wheat	cytosol, mitochondrion	46.81	40.09
TraesCS3D01G371600.1	Wheat	mitochondrion	47.87	40.09
TraesCS1D01G273200.1	Wheat	mitochondrion	47.87	39.65
TraesCS4D01G110100.1	Wheat	golgi	46.28	39.55
TraesCS2D01G584900.1	Wheat	cytosol, mitochondrion	47.07	37.74
TraesCS6D01G138700.1	Wheat	plastid	17.29	16.67

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573
ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF32	SUPFAM:SSF54518	SUPFAM:SSF81383
EnsemblPlantsGene:TraesCS1D01G336400	EnsemblPlants:TraesCS1D01G336400.1	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	SEG:seg

Description

No Description!

Coordinates

chr1D:+:426594914..426599359

Molecular Weight (calculated)

41878.6 Da

IEP (calculated)

9.163

GRAVY (calculated)

-0.484

Length

376 amino acids

Sequence
(BLAST)

001: MALWRRSSSW LTSCSRAPAG IGGGNEAKVS PEVAPEDAAA EHEGRRAEAG DEERWSRLLP ELLTDIVRRV DAGAERWPPR RDVVACACVC RRWRDAAVAV
101: VRPPLECGRI TFPSSLKQPG PRDAPMHCFI RRNKSTSTFY LYLSLTQALT DKGKFLLAAR RFRHGAHTEY IISYDSDDLY PGSNSGVGKL RSDFLGTKFV
201: MYDNQKPYDG AKSLKSRSSR RFATKQISPH VSGDNLEVGQ VSYRFNFLKS RGPRRMHCSI QCPVGQGTAS DPSKEKPPST SSSLSLKNKA PRWHDHLQCW
301: CLNFHGRVTV ASVKNFQLVA PADTSDPWGV GDEETVILQF GKIEDDAFTM DFRHPLSAYQ AFAICLTSFG TKLACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.