Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 6
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27356 | Soybean | mitochondrion | 94.75 | 95.5 |
| CDY02510 | Canola | cytosol | 68.77 | 81.62 |
| CDY25719 | Canola | cytosol | 69.29 | 80.0 |
| GSMUA_Achr7P25250_001 | Banana | cytosol | 64.04 | 76.73 |
| GSMUA_Achr3P31460_001 | Banana | cytosol | 64.04 | 76.25 |
| GSMUA_Achr4P01150_001 | Banana | cytosol | 62.2 | 74.29 |
| AT1G53320.1 | Thale cress | mitochondrion | 72.7 | 73.09 |
| CDY45927 | Canola | cytosol, plastid | 70.87 | 72.0 |
| Bra041095.1-P | Field mustard | cytosol, mitochondrion | 70.6 | 71.35 |
| CDY25863 | Canola | cytosol, mitochondrion | 70.6 | 71.35 |
| Bra030942.1-P | Field mustard | mitochondrion | 73.23 | 71.17 |
| VIT_19s0014g01250.t01 | Wine grape | mitochondrion | 74.8 | 71.07 |
| PGSC0003DMT400018209 | Potato | mitochondrion | 70.87 | 69.95 |
| Solyc07g062390.2.1 | Tomato | mitochondrion | 70.34 | 69.43 |
| TraesCS3B01G304600.1 | Wheat | cytosol | 61.42 | 66.67 |
| TraesCS3D01G270500.1 | Wheat | cytosol | 61.42 | 65.92 |
| TraesCS3A01G270800.1 | Wheat | cytosol | 61.15 | 65.63 |
| GSMUA_Achr7P13870_001 | Banana | mitochondrion, plastid | 50.66 | 65.42 |
| Os01t0674500-01 | Rice | cytosol | 60.89 | 65.17 |
| Os05t0514300-01 | Rice | mitochondrion | 62.99 | 64.52 |
| HORVU3Hr1G061930.1 | Barley | cytosol | 60.1 | 64.33 |
| Zm00001d011578_P003 | Maize | nucleus | 60.1 | 63.97 |
| GSMUA_Achr4P10540_001 | Banana | mitochondrion | 64.3 | 63.8 |
| Os05t0560400-00 | Rice | cytosol | 58.79 | 63.64 |
| EES03425 | Sorghum | plastid | 60.1 | 63.61 |
| GSMUA_Achr10P... | Banana | mitochondrion | 61.68 | 63.51 |
| Zm00001d038691_P001 | Maize | mitochondrion | 60.1 | 62.4 |
| EES18499 | Sorghum | mitochondrion | 60.89 | 62.37 |
| TraesCS1A01G333900.1 | Wheat | mitochondrion | 60.37 | 61.66 |
| TraesCS1D01G336400.1 | Wheat | mitochondrion | 60.63 | 61.44 |
| TraesCS1B01G347200.1 | Wheat | mitochondrion | 60.1 | 61.39 |
| HORVU1Hr1G076900.1 | Barley | cytosol | 58.53 | 57.92 |
| Zm00001d043895_P003 | Maize | cytosol | 57.22 | 57.67 |
| OQU78419 | Sorghum | cytosol | 54.33 | 54.91 |
| KRH21017 | Soybean | mitochondrion | 41.73 | 54.83 |
| Os01t0759100-01 | Rice | cytosol, plastid | 50.92 | 52.72 |
| KRH11270 | Soybean | cytosol | 50.92 | 50.39 |
| KRH50928 | Soybean | cytosol | 46.19 | 49.03 |
| KRH69894 | Soybean | cytosol | 52.23 | 48.07 |
| KRH28692 | Soybean | cytosol | 52.23 | 48.07 |
| KRH76777 | Soybean | cytosol | 51.71 | 47.47 |
| KRH08239 | Soybean | cytosol | 51.44 | 47.34 |
| KRH71532 | Soybean | cytosol | 49.61 | 47.25 |
| KRH35144 | Soybean | cytosol, mitochondrion | 50.92 | 45.12 |
| KRG91652 | Soybean | cytosol, mitochondrion | 50.92 | 45.12 |
| KRH70303 | Soybean | cytosol | 49.61 | 44.58 |
| KRH08694 | Soybean | mitochondrion | 49.34 | 44.34 |
| KRH10476 | Soybean | cytosol, mitochondrion | 49.61 | 44.26 |
| KRH02194 | Soybean | cytosol | 45.41 | 44.13 |
| KRH43964 | Soybean | cytosol, mitochondrion | 49.08 | 43.79 |
| KRH15179 | Soybean | cytosol | 47.51 | 42.79 |
| KRH49321 | Soybean | cytosol | 19.68 | 40.98 |
| KRH05837 | Soybean | mitochondrion | 48.03 | 40.31 |
| KRH21016 | Soybean | cytosol | 9.19 | 35.0 |
| HORVU0Hr1G001350.2 | Barley | cytosol | 33.33 | 34.05 |
| KRH25611 | Soybean | cytosol | 20.21 | 26.1 |
| KRH23693 | Soybean | plastid | 17.32 | 18.54 |
Protein Annotations
| EntrezGene:100801919 | MapMan:15.5.21 | Gene3D:3.20.90.10 | EMBL:ACUP02008373 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_13G269600 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 |
| UniProt:I1M301 | InterPro:IPR001810 | InterPro:IPR025659 | EnsemblPlants:KRH21960 | ProteinID:KRH21960 | ProteinID:KRH21960.1 |
| PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 |
| PANTHER:PTHR16517:SF50 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS |
| UniParc:UPI000233B6A0 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:37172857..37177184
Molecular Weight (calculated)
41990.0 Da
IEP (calculated)
9.522
GRAVY (calculated)
-0.386
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLRKVFRSR KFSRSFKEVL PAEGAAIVGG EDGVAGAGEE SSNGNNGWSN MLPEILGEIV RRVDAAEEQW PNRQNVVACA CVCKRWRDIT REVVRVPSHT
101: GKITFPACLK QPGPRDVPHQ CLIKRNKKTS TFYLYLALTP SFTDKGKFLL AARRYRCGTH TEYIISLDAD DLSQGSNAYV GKLSSDFLGT NFTIYDSQPP
201: HSGAKPSSGR ASRRFASKQI SPQVPAGNFE VGQVSYKFNL LKSRGPRRMV CSLKCPVTPV VSPSVESSDS TPVNGHKIPD KEQVASGYTI LKNKAPRWHE
301: HLQCWCLNFH GRVTVASVKN FQLVATVDQS QPGGKGDEET VLLQFGKVGD DTFTMDYRQP LSAFQAFAIC LTSFGTKLAC E
101: GKITFPACLK QPGPRDVPHQ CLIKRNKKTS TFYLYLALTP SFTDKGKFLL AARRYRCGTH TEYIISLDAD DLSQGSNAYV GKLSSDFLGT NFTIYDSQPP
201: HSGAKPSSGR ASRRFASKQI SPQVPAGNFE VGQVSYKFNL LKSRGPRRMV CSLKCPVTPV VSPSVESSDS TPVNGHKIPD KEQVASGYTI LKNKAPRWHE
301: HLQCWCLNFH GRVTVASVKN FQLVATVDQS QPGGKGDEET VLLQFGKVGD DTFTMDYRQP LSAFQAFAIC LTSFGTKLAC E
001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE
Arabidopsis Description
TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.