CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69894	Soybean	cytosol	94.44	94.44
KRH76777	Soybean	cytosol	81.16	80.96
KRH28692	Soybean	cytosol	80.92	80.92
VIT_04s0023g01950.t01	Wine grape	cytosol	77.78	77.97
PGSC0003DMT400016310	Potato	cytosol	71.5	73.82
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	31.64	73.6
GSMUA_Achr2P23080_001	Banana	cytosol	24.15	73.53
Solyc04g071750.2.1	Tomato	cytosol	70.77	73.25
PGSC0003DMT400058090	Potato	cytosol	71.74	73.15
Solyc03g033980.2.1	Tomato	cytosol	71.5	72.91
PGSC0003DMT400009280	Potato	cytosol	71.26	72.48
Solyc02g085130.2.1	Tomato	cytosol	71.5	72.02
GSMUA_Achr6P09030_001	Banana	cytosol	61.84	70.72
PGSC0003DMT400040088	Potato	cytosol	69.57	70.24
Solyc02g062670.2.1	Tomato	cytosol	69.32	69.83
CDY46301	Canola	cytosol	59.9	65.61
Bra039620.1-P	Field mustard	cytosol	59.9	65.61
CDY25159	Canola	cytosol	59.18	65.33
TraesCS6A01G272800.1	Wheat	cytosol	67.63	65.27
TraesCS6B01G300200.1	Wheat	cytosol	67.15	65.26
KRH15179	Soybean	cytosol	66.43	65.01
TraesCS6D01G252800.1	Wheat	cytosol	66.67	64.94
HORVU6Hr1G068970.3	Barley	cytosol	66.67	64.64
AT2G18280.2	Thale cress	cytosol	61.35	64.47
EES07397	Sorghum	cytosol	65.94	63.05
GSMUA_Achr2P22940_001	Banana	cytosol	55.56	62.67
Zm00001d051568_P001	Maize	cytosol	65.46	62.16
Zm00001d017773_P001	Maize	cytosol	65.46	62.01
KRH05837	Soybean	mitochondrion	66.91	61.01
KRH21017	Soybean	mitochondrion	40.58	57.93
CDY65687	Canola	cytosol, mitochondrion	51.45	56.95
CDY17028	Canola	mitochondrion, nucleus	54.11	56.71
Bra040862.1-P	Field mustard	mitochondrion, nucleus	54.11	56.57
AT1G47270.1	Thale cress	nucleus	55.31	55.45
Bra015624.1-P	Field mustard	cytosol, mitochondrion	53.86	55.34
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	39.61	55.22
KRH11270	Soybean	cytosol	51.21	55.06
KRH71532	Soybean	cytosol	52.66	54.5
KRH50928	Soybean	cytosol	46.62	53.76
KRH10476	Soybean	cytosol, mitochondrion	54.83	53.16
KRH43964	Soybean	cytosol, mitochondrion	54.59	52.93
KRH21960	Soybean	mitochondrion	47.34	51.44
KRH70303	Soybean	cytosol	52.66	51.42
KRH08694	Soybean	mitochondrion	52.66	51.42
KRH35144	Soybean	cytosol, mitochondrion	53.38	51.4
KRG91652	Soybean	cytosol, mitochondrion	53.38	51.4
KRH27356	Soybean	mitochondrion	46.62	51.06
KRH02194	Soybean	cytosol	47.58	50.26
CDY10578	Canola	mitochondrion	5.07	50.0
KRH21016	Soybean	cytosol	11.35	47.0
KRH49321	Soybean	cytosol	20.77	46.99
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	21.26	44.67
GSMUA_Achr10P...	Banana	nucleus	21.26	41.9
CDY06747	Canola	cytosol, mitochondrion	51.21	36.68
Zm00001d033948_P004	Maize	cytosol	14.01	32.04
KRH25611	Soybean	cytosol	22.71	31.86
KRH23693	Soybean	plastid	18.84	21.91

Protein Annotations

EntrezGene:100777506	MapMan:15.5.21	Gene3D:3.20.90.10	EMBL:ACUP02010152	EMBL:BT098389	UniProt:C6TL14
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_16G138100	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0008289	GO:GO:0035091	InterPro:IPR001810	InterPro:IPR025659	EnsemblPlants:KRH08239	ProteinID:KRH08239
ProteinID:KRH08239.1	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201
PANTHER:PTHR16517	PANTHER:PTHR16517:SF74	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C
InterPro:Tubby_C_CS	UniParc:UPI0001B16EE5	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:29520366..29523874

Molecular Weight (calculated)

46251.3 Da

IEP (calculated)

8.847

GRAVY (calculated)

-0.283

Length

414 amino acids

Sequence
(BLAST)

001: MSLRSIVREL KEMRDGIGST SKRGAESKHW LSRTKSHVAP DILATPFEPI QQGQWANLPS ELLLDIIQRI EESETSWPAR AVVVFCASVC KSWRSITREI
101: VKTPEQCGRI TFPISLKQPG PRDSPIQCFI RRNKETSTYL LYFGLVPSEN DGNKLLLAAK RIRRATGTDF IISLAADDFS RASNKYVGKL RSNFLGTKFT
201: IFDSQAPNDV AIQPNCQSSR RFHSKQVSPR LPACNYLVST VSYELNVLCT RGPRRMYCVM NSIPVSAIQE GGNAPTPASY PQIFDEHFSP SPALKEKVPV
301: TDLNSASLSE PPVSSQCSAE QLALKNRAPR WHEQLQCWCL NFKGRVSVAS VKNFQLVAAV DPSHNISAEE QEKVILQFGK IGKDIFTMDY CYPLSTFQAF
401: AICLSSFDTK PACE

Best Arabidopsis Sequence Match ( AT2G18280.1 )
(BLAST)

001: MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS LPPELLHDII WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG

Arabidopsis Description

TULP2Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.