CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50928	Soybean	cytosol	84.69	92.48
KRH21017	Soybean	mitochondrion	56.63	76.55
VIT_05s0020g01930.t01	Wine grape	cytosol	62.5	70.0
KRH11270	Soybean	cytosol	68.37	69.61
PGSC0003DMT400027634	Potato	cytosol	61.99	62.63
KRH71532	Soybean	cytosol	60.71	59.5
Solyc01g067680.2.1	Tomato	cytosol	35.46	55.82
KRH21016	Soybean	cytosol	13.01	51.0
KRH28692	Soybean	cytosol	51.02	48.31
KRH76777	Soybean	cytosol	50.51	47.71
KRH08239	Soybean	cytosol	50.26	47.58
KRH08694	Soybean	mitochondrion	51.28	47.41
KRH69894	Soybean	cytosol	50.0	47.34
KRH70303	Soybean	cytosol	50.77	46.93
KRG91652	Soybean	cytosol, mitochondrion	51.28	46.74
KRH35144	Soybean	cytosol, mitochondrion	51.28	46.74
KRH10476	Soybean	cytosol, mitochondrion	50.77	46.6
KRH15179	Soybean	cytosol	50.0	46.34
KRH43964	Soybean	cytosol, mitochondrion	50.26	46.14
KRH27356	Soybean	mitochondrion	43.88	45.5
KRH21960	Soybean	mitochondrion	44.13	45.41
KRH49321	Soybean	cytosol	20.92	44.81
KRH05837	Soybean	mitochondrion	50.26	43.39
AT1G61940.2	Thale cress	cytosol	24.74	36.6
KRH25611	Soybean	cytosol	25.77	34.24
KRH23693	Soybean	plastid	17.86	19.66

Protein Annotations

EntrezGene:100805161	MapMan:15.5.21	Gene3D:3.20.90.10	EMBL:ACUP02010299	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_17G022700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091
UniProt:I1MRE0	InterPro:IPR001810	InterPro:IPR025659	EnsemblPlants:KRH02194	ProteinID:KRH02194	ProteinID:KRH02194.1
PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	PANTHER:PTHR16517	PANTHER:PTHR16517:SF73
SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00023D4F9B
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:1661386..1663779

Molecular Weight (calculated)

44017.9 Da

IEP (calculated)

8.969

GRAVY (calculated)

-0.118

Length

392 amino acids

Sequence
(BLAST)

001: MIEVQANAME QSWWANMPHE LLREVLLRIE SSESTWPLRR SVVACGGVCR TWRRLIVKEI VKPPQFSSNI TFPISLKQPG PREHLLQCFI RRNSASQTYY
101: LFLSLSSALV ADDGKFLLAA RKFRRPTCTD YIISLDADDM SRESNAYVGK LRSTLNQILL LAILLFLFLS AKTNPLSSHF IRSNFLGTKF TIYDRKSCST
201: ELVVNSKQVS PRPRVPTGNY PVAHISYELN VLGSRGPRRM HCVMDTIPAS AIEPGGVAVA APSQTDFSVS NRDTSFPFFQ TNSTSLENSI SGDQSNKKDD
301: VLVLRNKAAR WHEQLQCWCL NFHGRVTIAS VKNFQLAVSP ENGHAGLQED EVILQFGKIG KDLFTMDYRY PISAFQAFAI CLSSFATTVA CE

Best Arabidopsis Sequence Match ( AT2G47900.1 )
(BLAST)

001: MSFKSLIQDM RGELGSISRK GFDVRFGYGR SRSQRVVQDT SVPVDAFKQS CWASMPPELL RDVLMRIEQS EDTWPSRKNV VSCAGVCRNW REIVKEIVRV
101: PELSSKLTFP ISLKQPGPRG SLVQCYIMRN RSNQTYYLYL GLNQAASNDD GKFLLAAKRF RRPTCTDYII SLNCDDVSRG SNTYIGKLRS NFLGTKFTVY
201: DAQPTNPGTQ VTRTRSSRLL SLKQVSPRIP SGNYPVAHIS YELNVLGSRG PRRMQCVMDA IPASAVEPGG TAPTQTELVH SNLDSFPSFS FFRSKSIRAE
301: SLPSGPSSAA QKEGLLVLKN KAPRWHEQLQ CWCLNFNGRV TVASVKNFQL VAAPENGPAG PEHENVILQF GKVGKDVFTM DYQYPISAFQ AFTICLSSFD
401: TKIACE

Arabidopsis Description

AtTLP3TLP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VYB2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.