Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08694 | Soybean | mitochondrion | 96.46 | 96.46 |
| HORVU5Hr1G023650.1 | Barley | plastid | 49.53 | 87.14 |
| VIT_18s0072g00630.t01 | Wine grape | cytosol | 86.79 | 86.59 |
| KRG91652 | Soybean | cytosol, mitochondrion | 87.03 | 85.81 |
| KRH35144 | Soybean | cytosol, mitochondrion | 86.79 | 85.58 |
| KRH10476 | Soybean | cytosol, mitochondrion | 84.2 | 83.61 |
| KRH43964 | Soybean | cytosol, mitochondrion | 83.25 | 82.67 |
| PGSC0003DMT400061933 | Potato | cytosol | 81.6 | 81.22 |
| Solyc04g071440.2.1 | Tomato | mitochondrion | 81.37 | 80.99 |
| GSMUA_Achr9P08860_001 | Banana | cytosol, mitochondrion | 75.71 | 75.0 |
| KRH49321 | Soybean | cytosol | 32.31 | 74.86 |
| KXG23034 | Sorghum | cytosol, mitochondrion | 72.64 | 70.48 |
| Os12t0163400-01 | Rice | cytosol | 73.82 | 70.34 |
| TraesCS5D01G132000.1 | Wheat | cytosol, mitochondrion | 71.7 | 69.25 |
| TraesCS4D01G110100.1 | Wheat | golgi | 71.7 | 69.09 |
| TraesCS5A01G124100.1 | Wheat | cytosol | 71.46 | 69.02 |
| TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 71.46 | 68.86 |
| TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 71.23 | 68.64 |
| TraesCS5B01G123800.1 | Wheat | golgi | 70.99 | 68.56 |
| Zm00001d053179_P001 | Maize | cytosol | 70.52 | 66.74 |
| EES08030 | Sorghum | cytosol, mitochondrion | 69.81 | 64.91 |
| KRH21017 | Soybean | mitochondrion | 41.27 | 60.34 |
| GSMUA_Achr11P... | Banana | cytosol | 58.49 | 59.76 |
| KRH11270 | Soybean | cytosol | 50.94 | 56.1 |
| KRH71532 | Soybean | cytosol | 52.83 | 56.0 |
| KRH28692 | Soybean | cytosol | 53.77 | 55.07 |
| KRH76777 | Soybean | cytosol | 53.54 | 54.7 |
| KRH50928 | Soybean | cytosol | 46.23 | 54.6 |
| KRH69894 | Soybean | cytosol | 51.89 | 53.14 |
| KRH15179 | Soybean | cytosol | 52.59 | 52.72 |
| KRH08239 | Soybean | cytosol | 51.42 | 52.66 |
| KRH02194 | Soybean | cytosol | 46.93 | 50.77 |
| KRH25611 | Soybean | cytosol | 35.14 | 50.51 |
| KRH21960 | Soybean | mitochondrion | 44.58 | 49.61 |
| KRH27356 | Soybean | mitochondrion | 44.1 | 49.47 |
| KRH05837 | Soybean | mitochondrion | 52.36 | 48.9 |
| KRH21016 | Soybean | cytosol | 10.38 | 44.0 |
| KRH23693 | Soybean | plastid | 18.4 | 21.91 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100799499 | MapMan:15.5.21 | EMBL:ACUP02000762 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_02G081800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 |
| UniProt:I1JDE5 | InterPro:IPR001810 | InterPro:IPR025659 | ProteinID:KRH70300.1 | ProteinID:KRH70301.1 | ProteinID:KRH70302.1 |
| EnsemblPlants:KRH70303 | ProteinID:KRH70303 | ProteinID:KRH70303.1 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 |
| ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF31 | SUPFAM:SSF54518 | SUPFAM:SSF81383 |
| InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS | UniParc:UPI0002337223 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:-:7065191..7069984
Molecular Weight (calculated)
47551.0 Da
IEP (calculated)
9.723
GRAVY (calculated)
-0.344
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRSIVRDV RDGFGSLSRR SFDVRISGGG KLNSLVHEAH ERQLVIQNSR WASLPPELLC DVIKRLEESE STWPARKHVV ACAAVCKSWR EMCKEIVTSP
101: EFCGKITFPV SLKQPGSRDG TIQCFIKRDK SNLTYHLFLC LSPALLVENG KFLLSAKRTR RTTCTEYIIS MDADNISRSN STYIGKLRSN FLGTKFIIYD
201: TQPPYNNAQL SPPGRSRRFY SKKVSPKVPS GSYNIAQITY ELNVLGTRGP RRMNCTMHSI PMSALEPGCT VPGQPELLPR SLEDSFRSIS FARSIDNSTE
301: FSSSRFSDIF VAGNEEEQGK GRPLVLKNKS PRWHEQLQCW CLNFRGRVTV ASVKNFQLIA ATQPPAAGAP TPSSQPAQSD HDKIILQFGK VGKDIFTMDY
401: RYPLSAFQAF AICLTSFDTK LACE
101: EFCGKITFPV SLKQPGSRDG TIQCFIKRDK SNLTYHLFLC LSPALLVENG KFLLSAKRTR RTTCTEYIIS MDADNISRSN STYIGKLRSN FLGTKFIIYD
201: TQPPYNNAQL SPPGRSRRFY SKKVSPKVPS GSYNIAQITY ELNVLGTRGP RRMNCTMHSI PMSALEPGCT VPGQPELLPR SLEDSFRSIS FARSIDNSTE
301: FSSSRFSDIF VAGNEEEQGK GRPLVLKNKS PRWHEQLQCW CLNFRGRVTV ASVKNFQLIA ATQPPAAGAP TPSSQPAQSD HDKIILQFGK VGKDIFTMDY
401: RYPLSAFQAF AICLTSFDTK LACE
001: MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK
101: EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
201: KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
301: TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
401: TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT KLACE
101: EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
201: KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
301: TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
401: TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT KLACE
Arabidopsis Description
TULP1Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WI43]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.