Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH05837 | Soybean | mitochondrion | 94.8 | 88.33 |
| GSMUA_Achr2P23080_001 | Banana | cytosol | 25.06 | 77.94 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 30.5 | 72.47 |
| VIT_18s0001g12660.t01 | Wine grape | cytosol | 70.92 | 72.12 |
| GSMUA_Achr6P09030_001 | Banana | cytosol | 58.16 | 67.96 |
| KRH28692 | Soybean | cytosol | 65.48 | 66.91 |
| KRH08239 | Soybean | cytosol | 65.01 | 66.43 |
| KRH69894 | Soybean | cytosol | 65.01 | 66.43 |
| KRH76777 | Soybean | cytosol | 64.78 | 66.02 |
| TraesCS6A01G272800.1 | Wheat | cytosol | 65.01 | 64.1 |
| TraesCS6B01G300200.1 | Wheat | cytosol | 64.54 | 64.08 |
| GSMUA_Achr2P22940_001 | Banana | cytosol | 55.56 | 64.03 |
| TraesCS6D01G252800.1 | Wheat | cytosol | 64.07 | 63.76 |
| HORVU6Hr1G068970.3 | Barley | cytosol | 64.07 | 63.47 |
| EES07397 | Sorghum | cytosol | 62.88 | 61.43 |
| Zm00001d017773_P001 | Maize | cytosol | 63.36 | 61.33 |
| Zm00001d051568_P001 | Maize | cytosol | 62.41 | 60.55 |
| KRH21017 | Soybean | mitochondrion | 39.01 | 56.9 |
| KRH71532 | Soybean | cytosol | 52.96 | 56.0 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 38.3 | 54.55 |
| KRH50928 | Soybean | cytosol | 46.1 | 54.32 |
| KRH11270 | Soybean | cytosol | 49.41 | 54.29 |
| KRH10476 | Soybean | cytosol, mitochondrion | 54.14 | 53.63 |
| KRH43964 | Soybean | cytosol, mitochondrion | 53.9 | 53.4 |
| KRH08694 | Soybean | mitochondrion | 53.19 | 53.07 |
| KRH70303 | Soybean | cytosol | 52.72 | 52.59 |
| KRG91652 | Soybean | cytosol, mitochondrion | 53.43 | 52.56 |
| KRH35144 | Soybean | cytosol, mitochondrion | 53.43 | 52.56 |
| KRH02194 | Soybean | cytosol | 46.34 | 50.0 |
| KRH27356 | Soybean | mitochondrion | 42.55 | 47.62 |
| KRH21960 | Soybean | mitochondrion | 42.79 | 47.51 |
| KRH49321 | Soybean | cytosol | 19.62 | 45.36 |
| GSMUA_Achr2P23070_001 | Banana | cytosol, mitochondrion | 20.57 | 44.16 |
| KRH21016 | Soybean | cytosol | 10.4 | 44.0 |
| GSMUA_Achr10P... | Banana | nucleus | 19.39 | 39.05 |
| Zm00001d033948_P004 | Maize | cytosol | 14.18 | 33.15 |
| KRH25611 | Soybean | cytosol | 22.93 | 32.88 |
| Os03t0348500-00 | Rice | extracellular | 9.93 | 24.85 |
| KRH23693 | Soybean | plastid | 20.57 | 24.44 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100796250 | MapMan:15.5.21 | EMBL:ACUP02008569 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_14G073500 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 |
| UniProt:I1M8B1 | InterPro:IPR001810 | InterPro:IPR025659 | EnsemblPlants:KRH15179 | ProteinID:KRH15179 | ProteinID:KRH15179.1 |
| ProteinID:KRH15180.1 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 |
| PANTHER:PTHR16517 | PANTHER:PTHR16517:SF75 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| InterPro:Tubby_C_CS | UniParc:UPI000233B3E9 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:6170745..6174605
Molecular Weight (calculated)
47360.4 Da
IEP (calculated)
9.411
GRAVY (calculated)
-0.312
Length
423 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFRSIVREL KEIGEGISNM YRRGGEAKHV HRHGKSHIAP ECSLPPPPPP PPSSSSQSRW ANLPPELLLD IIQRLEASET SWPARRALVA CASVCRLWRE
101: ITKDVIKTPE QCGLLTFPIS LKQPGPRDSP IQCFIRRERM TSTYCLYLGL SPALSGDMSK LLLAAKKIRR ATCTEFIISL VADDFSRACD TYVGKLRSNF
201: LGTKFTILDG EPPHDSSLPL NCKLQQRVHL KQVLPNKVSA ANYKVATVSY ELNVLRTRGP RRMRCMMHLI PISAIQEGGN APTPLKFTNY LNDYASTTIP
301: DTKGKKPEVV EFDSTGTDNT PESIQRAREP LILKNKAPRW HEQLQCWCLN FKGRVTVASV KNFQLVAAAE PCQNVSAAEQ EKVILQFGKI GKDIFTMDYR
401: YPLSAFQAFA ICLSSFDTKP ACE
101: ITKDVIKTPE QCGLLTFPIS LKQPGPRDSP IQCFIRRERM TSTYCLYLGL SPALSGDMSK LLLAAKKIRR ATCTEFIISL VADDFSRACD TYVGKLRSNF
201: LGTKFTILDG EPPHDSSLPL NCKLQQRVHL KQVLPNKVSA ANYKVATVSY ELNVLRTRGP RRMRCMMHLI PISAIQEGGN APTPLKFTNY LNDYASTTIP
301: DTKGKKPEVV EFDSTGTDNT PESIQRAREP LILKNKAPRW HEQLQCWCLN FKGRVTVASV KNFQLVAAAE PCQNVSAAEQ EKVILQFGKI GKDIFTMDYR
401: YPLSAFQAFA ICLSSFDTKP ACE
001: MDLSLLLPKR SWEISGGADK IRVAMSLKNI VKNKYKAIGR RGRSHIAPEG SSVSSSLSTN EGLNQSIWVD LPPELLLDII QRIESEQSLW PGRRDVVACA
101: SVCKSWREMT KEVVKVPELS GLITFPISLR QPGPRDAPIQ CFIKRERATG IYRLYLGLSP ALSGDKSKLL LSAKRVRRAT GAEFVVSLSG NDFSRSSSNY
201: IGKLRSNFLG TKFTVYENQP PPFNRKLPPS MQVSPWVSSS SSSYNIASIL YELNVLRTRG PRRMQCIMHS IPISAIQEGG KIQSPTEFTN QGKKKKKPLM
301: DFCSGNLGGE SVIKEPLILK NKSPRWHEQL QCWCLNFKGR VTVASVKNFQ LVAAAAEAGK NMNIPEEEQD RVILQFGKIG KDIFTMDYRY PISAFQAFAI
401: CLSSFDTKPV CE
101: SVCKSWREMT KEVVKVPELS GLITFPISLR QPGPRDAPIQ CFIKRERATG IYRLYLGLSP ALSGDKSKLL LSAKRVRRAT GAEFVVSLSG NDFSRSSSNY
201: IGKLRSNFLG TKFTVYENQP PPFNRKLPPS MQVSPWVSSS SSSYNIASIL YELNVLRTRG PRRMQCIMHS IPISAIQEGG KIQSPTEFTN QGKKKKKPLM
301: DFCSGNLGGE SVIKEPLILK NKSPRWHEQL QCWCLNFKGR VTVASVKNFQ LVAAAAEAGK NMNIPEEEQD RVILQFGKIG KDIFTMDYRY PISAFQAFAI
401: CLSSFDTKPV CE
Arabidopsis Description
TULP6Tubby-like F-box protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q0WPY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.