CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49321	Soybean	cytosol	44.75	72.13
KRH21016	Soybean	cytosol	13.9	41.0
KRG91652	Soybean	cytosol, mitochondrion	54.92	37.67
KRH35144	Soybean	cytosol, mitochondrion	54.24	37.21
KRH70303	Soybean	cytosol	50.51	35.14
KRH08694	Soybean	mitochondrion	49.49	34.43
KRH43964	Soybean	cytosol, mitochondrion	49.49	34.19
KRH10476	Soybean	cytosol, mitochondrion	49.15	33.96
KRH71532	Soybean	cytosol	37.63	27.75
KRH50928	Soybean	cytosol	33.56	27.58
KRH11270	Soybean	cytosol	34.92	26.75
KRH02194	Soybean	cytosol	34.24	25.77
KRH28692	Soybean	cytosol	34.24	24.4
KRH76777	Soybean	cytosol	33.22	23.61
KRH15179	Soybean	cytosol	32.88	22.93
KRH08239	Soybean	cytosol	31.86	22.71
KRH69894	Soybean	cytosol	31.53	22.46
KRH05837	Soybean	mitochondrion	34.24	22.25
KRH21017	Soybean	mitochondrion	21.69	22.07
KRH27356	Soybean	mitochondrion	26.78	20.9
KRH21960	Soybean	mitochondrion	26.1	20.21
KRH23693	Soybean	plastid	12.2	10.11

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	EMBL:ACUP02007296	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_12G115200	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091	UniProt:I1LS46	InterPro:IPR001810
InterPro:IPR025659	EnsemblPlants:KRH25611	ProteinID:KRH25611	ProteinID:KRH25611.1	PFAM:PF00646	PFAM:PF01167
PANTHER:PTHR16517	PANTHER:PTHR16517:SF31	SUPFAM:SSF54518	InterPro:Tubby-like_C	InterPro:Tubby_C	UniParc:UPI00029625C8

Description

hypothetical protein

Coordinates

chr12:-:11504380..11506234

Molecular Weight (calculated)

33621.8 Da

IEP (calculated)

7.675

GRAVY (calculated)

-0.296

Length

295 amino acids

Sequence
(BLAST)

001: MHSSVHELQD QPPVIQNSRW ASLPLELLGD VINRLEASES TWPGRKHVVA CVAMCKSWRE MCKEIVSSPE FCGKITFPVS LKQRQIKLTY HLFLCLSPVL
101: LVENGKFLLS AKWTRRTTCT EYIISMNTDN ISRSSSTYIG KLRSKTIILV CVCERERMMI KDKWLPLHTL AACGEFYLLD SLLKHNVDIN VLKNEDSGPL
201: KESTSLIEHR KWDGLYCLPS EKSEIVSDEY LPTNDPKSNN NINDEAAELV KLTEQSLLLK KRTNQTKPRP IVVRLDDGDV APISVKRPEP MDDIV

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.