Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70303 | Soybean | cytosol | 96.46 | 96.46 |
| VIT_18s0072g00630.t01 | Wine grape | cytosol | 87.26 | 87.06 |
| HORVU5Hr1G023650.1 | Barley | plastid | 49.29 | 86.72 |
| KRG91652 | Soybean | cytosol, mitochondrion | 86.79 | 85.58 |
| KRH35144 | Soybean | cytosol, mitochondrion | 86.56 | 85.35 |
| KRH10476 | Soybean | cytosol, mitochondrion | 83.96 | 83.37 |
| KRH43964 | Soybean | cytosol, mitochondrion | 83.02 | 82.44 |
| PGSC0003DMT400061933 | Potato | cytosol | 81.6 | 81.22 |
| Solyc04g071440.2.1 | Tomato | mitochondrion | 81.37 | 80.99 |
| GSMUA_Achr9P08860_001 | Banana | cytosol, mitochondrion | 75.94 | 75.23 |
| KRH49321 | Soybean | cytosol | 31.84 | 73.77 |
| Os12t0163400-01 | Rice | cytosol | 74.76 | 71.24 |
| KXG23034 | Sorghum | cytosol, mitochondrion | 72.88 | 70.71 |
| TraesCS4D01G110100.1 | Wheat | golgi | 71.93 | 69.32 |
| TraesCS5D01G132000.1 | Wheat | cytosol, mitochondrion | 71.7 | 69.25 |
| TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 71.7 | 69.09 |
| TraesCS5A01G124100.1 | Wheat | cytosol | 71.46 | 69.02 |
| TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 71.46 | 68.86 |
| TraesCS5B01G123800.1 | Wheat | golgi | 70.99 | 68.56 |
| Zm00001d053179_P001 | Maize | cytosol | 70.99 | 67.19 |
| EES08030 | Sorghum | cytosol, mitochondrion | 70.99 | 66.01 |
| KRH21017 | Soybean | mitochondrion | 41.51 | 60.69 |
| GSMUA_Achr11P... | Banana | cytosol | 58.49 | 59.76 |
| KRH11270 | Soybean | cytosol | 51.89 | 57.14 |
| KRH71532 | Soybean | cytosol | 53.07 | 56.25 |
| KRH50928 | Soybean | cytosol | 46.93 | 55.43 |
| KRH28692 | Soybean | cytosol | 54.01 | 55.31 |
| KRH76777 | Soybean | cytosol | 53.77 | 54.94 |
| KRH15179 | Soybean | cytosol | 53.07 | 53.19 |
| KRH69894 | Soybean | cytosol | 51.89 | 53.14 |
| KRH08239 | Soybean | cytosol | 51.42 | 52.66 |
| KRH02194 | Soybean | cytosol | 47.41 | 51.28 |
| KRH25611 | Soybean | cytosol | 34.43 | 49.49 |
| KRH21960 | Soybean | mitochondrion | 44.34 | 49.34 |
| KRH27356 | Soybean | mitochondrion | 43.87 | 49.21 |
| KRH05837 | Soybean | mitochondrion | 52.36 | 48.9 |
| KRH21016 | Soybean | cytosol | 11.08 | 47.0 |
| KRH23693 | Soybean | plastid | 18.4 | 21.91 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100803729 | MapMan:15.5.21 | EMBL:ACUP02010196 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_16G167200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 |
| UniProt:I1MP70 | InterPro:IPR001810 | InterPro:IPR025659 | EnsemblPlants:KRH08694 | ProteinID:KRH08694 | ProteinID:KRH08694.1 |
| ProteinID:KRH08695.1 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 |
| PANTHER:PTHR16517 | PANTHER:PTHR16517:SF31 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| InterPro:Tubby_C_CS | UniParc:UPI000233AA7A | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr16:-:32643750..32648652
Molecular Weight (calculated)
47624.1 Da
IEP (calculated)
9.723
GRAVY (calculated)
-0.374
Length
424 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRSIVRDV RDGFGSLSRR SFDVRLSGGG KSNSLVHEEH ECLPVVQNSR WASLPPELLR DVIKRLEESE TTWPARKHVV ACAAVCRSWR GMCKEIVTSP
101: EFCGKITFPV SLKQPGSRDG TIQCFIKRDK SNLTYHLFLC LSPALLVENG KFLLSAKRTR RTTCTEYIIS MDADNISRSN STYIGKLRSN FLGTKFIIYD
201: TQPPYNNAQL SPPGRSRRFY SKKVSPKVPS GSYNIAQITY ELNVLGTRGP RRMNCTMHSI PMSALEPGCT VPGQPELLPR SLEDSFRSIS FARSIDNSTE
301: FSSSRFSDIF LAGKEEEQGK DRPLVLKNKS PRWHEQLQCW CLNFRGRVTV ASVKNFQLIA ATQPPATGAP TPSSQPAQSD HDKIILQFGK VGKDIFTMDY
401: RYPLSAFQAF AICLTSFDTK LACE
101: EFCGKITFPV SLKQPGSRDG TIQCFIKRDK SNLTYHLFLC LSPALLVENG KFLLSAKRTR RTTCTEYIIS MDADNISRSN STYIGKLRSN FLGTKFIIYD
201: TQPPYNNAQL SPPGRSRRFY SKKVSPKVPS GSYNIAQITY ELNVLGTRGP RRMNCTMHSI PMSALEPGCT VPGQPELLPR SLEDSFRSIS FARSIDNSTE
301: FSSSRFSDIF LAGKEEEQGK DRPLVLKNKS PRWHEQLQCW CLNFRGRVTV ASVKNFQLIA ATQPPATGAP TPSSQPAQSD HDKIILQFGK VGKDIFTMDY
401: RYPLSAFQAF AICLTSFDTK LACE
001: MSFLSIVRDV RDTVGSFSRR SFDVRVSNGT THQRSKSHGV EAHIEDLIVI KNTRWANLPA ALLRDVMKKL DESESTWPAR KQVVACAGVC KTWRLMCKDI
101: VKSPEFSGKL TFPVSLKQPG PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI SRSSSTYIGK LKSNFLGTKF
201: IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV
301: NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM
401: FTMDYRYPLS AFQAFAISLS TFDTKLACE
101: VKSPEFSGKL TFPVSLKQPG PRDGIIQCYI KRDKSNMTYH LYLSLSPAIL VESGKFLLSA KRSRRATYTE YVISMDADNI SRSSSTYIGK LKSNFLGTKF
201: IVYDTAPAYN SSQILSPPNR SRSFNSKKVS PKVPSGSYNI AQVTYELNLL GTRGPRRMNC IMHSIPSLAL EPGGTVPSQP EFLQRSLDES FRSIGSSKIV
301: NHSGDFTRPK EEEGKVRPLV LKTKPPRWLQ PLRCWCLNFK GRVTVASVKN FQLMSAATVQ PGSGSDGGAL ATRPSLSPQQ PEQSNHDKII LHFGKVGKDM
401: FTMDYRYPLS AFQAFAISLS TFDTKLACE
Arabidopsis Description
TULP5Tubby-like F-box protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q944S3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.