CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25611	Soybean	cytosol	72.13	44.75
KRH21016	Soybean	cytosol	21.86	40.0
KRG91652	Soybean	cytosol, mitochondrion	82.51	35.12
KRH35144	Soybean	cytosol, mitochondrion	80.87	34.42
KRH70303	Soybean	cytosol	74.86	32.31
KRH08694	Soybean	mitochondrion	73.77	31.84
KRH10476	Soybean	cytosol, mitochondrion	72.13	30.91
KRH43964	Soybean	cytosol, mitochondrion	72.13	30.91
KRH71532	Soybean	cytosol	53.01	24.25
KRH50928	Soybean	cytosol	42.62	21.73
KRH11270	Soybean	cytosol	45.36	21.56
KRH28692	Soybean	cytosol	48.09	21.26
KRH02194	Soybean	cytosol	44.81	20.92
KRH08239	Soybean	cytosol	46.99	20.77
KRH76777	Soybean	cytosol	46.99	20.72
KRH69894	Soybean	cytosol	46.45	20.53
KRH21960	Soybean	mitochondrion	40.98	19.68
KRH15179	Soybean	cytosol	45.36	19.62
KRH27356	Soybean	mitochondrion	40.44	19.58
KRH05837	Soybean	mitochondrion	46.45	18.72
KRH21017	Soybean	mitochondrion	24.59	15.52
KRH23693	Soybean	plastid	16.39	8.43

Protein Annotations

EntrezGene:100777316	MapMan:15.5.21	Gene3D:3.20.90.10	UniProt:A0A0R0J9S7	EMBL:ACUP02004355	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_07G147700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008289	GO:GO:0035091
InterPro:IPR001810	InterPro:IPR025659	EnsemblPlants:KRH49321	ProteinID:KRH49321	ProteinID:KRH49321.1	PFAM:PF00646
PFAM:PF01167	PANTHER:PTHR16517	PANTHER:PTHR16517:SF31	SUPFAM:SSF54518	InterPro:Tubby-like_C	InterPro:Tubby_C
UniParc:UPI0006EDC96B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:17765531..17780230

Molecular Weight (calculated)

20814.4 Da

IEP (calculated)

9.654

GRAVY (calculated)

-0.056

Length

183 amino acids

Sequence
(BLAST)

001: MSSSFIISNE SFSWLSTRDQ PPVIQNSRWA SLLLELLRDV INRLEASEST WPGCKHVVAC AAMCKSWREM CKEIVSSPEF CGKITFPVSL KQPGHRDGPI
101: QCFIKRDKSK LTYHLFLCLS PVLLVENGKF LLSAKRTRRT TCTKYIISMN ADNISRSSST YIGKLRINGF LSTLLLHVEN FTF

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.