Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- nucleus 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35144 | Soybean | cytosol, mitochondrion | 96.74 | 96.74 |
| VIT_18s0072g00630.t01 | Wine grape | cytosol | 86.05 | 87.06 |
| KRH70303 | Soybean | cytosol | 85.81 | 87.03 |
| KRH08694 | Soybean | mitochondrion | 85.58 | 86.79 |
| HORVU5Hr1G023650.1 | Barley | plastid | 46.74 | 83.4 |
| KRH10476 | Soybean | cytosol, mitochondrion | 82.09 | 82.67 |
| KRH49321 | Soybean | cytosol | 35.12 | 82.51 |
| KRH43964 | Soybean | cytosol, mitochondrion | 81.86 | 82.44 |
| Solyc04g071440.2.1 | Tomato | mitochondrion | 81.16 | 81.92 |
| PGSC0003DMT400061933 | Potato | cytosol | 81.16 | 81.92 |
| GSMUA_Achr9P08860_001 | Banana | cytosol, mitochondrion | 75.12 | 75.47 |
| Os12t0163400-01 | Rice | cytosol | 73.72 | 71.24 |
| KXG23034 | Sorghum | cytosol, mitochondrion | 71.63 | 70.48 |
| TraesCS5A01G124100.1 | Wheat | cytosol | 71.63 | 70.16 |
| TraesCS5B01G123800.1 | Wheat | golgi | 71.16 | 69.7 |
| TraesCS5D01G132000.1 | Wheat | cytosol, mitochondrion | 71.16 | 69.7 |
| TraesCS4D01G110100.1 | Wheat | golgi | 70.47 | 68.86 |
| TraesCS4B01G112600.1 | Wheat | cytosol, mitochondrion | 70.0 | 68.41 |
| TraesCS4A01G209000.1 | Wheat | cytosol, mitochondrion | 70.0 | 68.41 |
| Zm00001d053179_P001 | Maize | cytosol | 68.6 | 65.85 |
| EES08030 | Sorghum | cytosol, mitochondrion | 68.6 | 64.69 |
| KRH21017 | Soybean | mitochondrion | 41.16 | 61.03 |
| GSMUA_Achr11P... | Banana | cytosol | 57.21 | 59.28 |
| KRH11270 | Soybean | cytosol | 51.86 | 57.92 |
| KRH71532 | Soybean | cytosol | 53.72 | 57.75 |
| KRH28692 | Soybean | cytosol | 53.49 | 55.56 |
| KRH76777 | Soybean | cytosol | 53.26 | 55.18 |
| KRH50928 | Soybean | cytosol | 46.05 | 55.15 |
| KRH25611 | Soybean | cytosol | 37.67 | 54.92 |
| KRH69894 | Soybean | cytosol | 51.86 | 53.86 |
| KRH15179 | Soybean | cytosol | 52.56 | 53.43 |
| KRH08239 | Soybean | cytosol | 51.4 | 53.38 |
| KRH02194 | Soybean | cytosol | 46.74 | 51.28 |
| KRH21960 | Soybean | mitochondrion | 45.12 | 50.92 |
| KRH27356 | Soybean | mitochondrion | 44.42 | 50.53 |
| KRH05837 | Soybean | mitochondrion | 52.79 | 50.0 |
| KRH21016 | Soybean | cytosol | 11.16 | 48.0 |
| KRH23693 | Soybean | plastid | 19.53 | 23.6 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100817532 | MapMan:15.5.21 | EMBL:ACUP02012696 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_20G166900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 |
| UniProt:I1NH23 | InterPro:IPR001810 | InterPro:IPR025659 | EnsemblPlants:KRG91652 | ProteinID:KRG91652 | ProteinID:KRG91652.1 |
| ProteinID:KRG91653.1 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 |
| PANTHER:PTHR16517 | PANTHER:PTHR16517:SF31 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C |
| InterPro:Tubby_C_CS | UniParc:UPI000233D949 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:40496201..40500244
Molecular Weight (calculated)
48205.9 Da
IEP (calculated)
10.033
GRAVY (calculated)
-0.390
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MSFRSIVRDV RDGFGSLSRR SFEVRLPGHN RGKSRSSVHE LQDQPPVIQN SRWASLPPEL LRDVINRLEA SESTWPGRKH VVACAAVCKS WREMCKEIVS
101: SPEFCGKITF PVSLKQPGHR DGPIQCFIKR DKSKLTYHLF LCLSPALLVE NGKFLLSAKR TRRTTCTEYI ISMDADNISR SSSTYIGKLR SNFLGTKFII
201: YDTQPPYHNA MLSPPGRSRR FSKKVSPKVP SGSYNIAHVT YELNVLGTRG PRRMNCTMYS IPASSMEPNG IVPGQPELLP RALEDSFRSI SFSKSIDNST
301: EFSSSRFSDI MGIGNEDEEG KVRPLVLKNK SPRWHEQLQC WCLNFRGRVT VASVKNFQLI AATPPPAIVT TGTGPTPSQP TQSSSDPDKI ILQFGKVGKD
401: MFTMDYRYPL SAFQAFAICL TSFDTKLACE
101: SPEFCGKITF PVSLKQPGHR DGPIQCFIKR DKSKLTYHLF LCLSPALLVE NGKFLLSAKR TRRTTCTEYI ISMDADNISR SSSTYIGKLR SNFLGTKFII
201: YDTQPPYHNA MLSPPGRSRR FSKKVSPKVP SGSYNIAHVT YELNVLGTRG PRRMNCTMYS IPASSMEPNG IVPGQPELLP RALEDSFRSI SFSKSIDNST
301: EFSSSRFSDI MGIGNEDEEG KVRPLVLKNK SPRWHEQLQC WCLNFRGRVT VASVKNFQLI AATPPPAIVT TGTGPTPSQP TQSSSDPDKI ILQFGKVGKD
401: MFTMDYRYPL SAFQAFAICL TSFDTKLACE
001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE
Arabidopsis Description
TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.