Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28692 | Soybean | cytosol | 96.14 | 96.38 |
| KRH69894 | Soybean | cytosol | 81.69 | 81.88 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 34.94 | 81.46 |
| KRH08239 | Soybean | cytosol | 80.96 | 81.16 |
| VIT_04s0023g01950.t01 | Wine grape | cytosol | 77.83 | 78.21 |
| GSMUA_Achr2P23080_001 | Banana | cytosol | 25.3 | 77.21 |
| Solyc04g071750.2.1 | Tomato | cytosol | 73.49 | 76.25 |
| PGSC0003DMT400058090 | Potato | cytosol | 73.98 | 75.62 |
| Solyc03g033980.2.1 | Tomato | cytosol | 73.73 | 75.37 |
| PGSC0003DMT400016310 | Potato | cytosol | 72.77 | 75.31 |
| PGSC0003DMT400009280 | Potato | cytosol | 73.73 | 75.18 |
| GSMUA_Achr6P09030_001 | Banana | cytosol | 64.58 | 74.03 |
| Solyc02g085130.2.1 | Tomato | cytosol | 73.25 | 73.97 |
| PGSC0003DMT400040088 | Potato | cytosol | 71.81 | 72.68 |
| Solyc02g062670.2.1 | Tomato | cytosol | 71.33 | 72.02 |
| TraesCS6B01G300200.1 | Wheat | cytosol | 70.12 | 68.31 |
| TraesCS6D01G252800.1 | Wheat | cytosol | 69.88 | 68.24 |
| CDY46301 | Canola | cytosol | 61.93 | 67.99 |
| Bra039620.1-P | Field mustard | cytosol | 61.93 | 67.99 |
| TraesCS6A01G272800.1 | Wheat | cytosol | 70.12 | 67.83 |
| HORVU6Hr1G068970.3 | Barley | cytosol | 69.64 | 67.68 |
| CDY25159 | Canola | cytosol | 60.96 | 67.47 |
| EES07397 | Sorghum | cytosol | 70.36 | 67.44 |
| Zm00001d017773_P001 | Maize | cytosol | 70.12 | 66.59 |
| Zm00001d051568_P001 | Maize | cytosol | 69.88 | 66.51 |
| AT2G18280.2 | Thale cress | cytosol | 63.13 | 66.5 |
| KRH15179 | Soybean | cytosol | 66.02 | 64.78 |
| GSMUA_Achr2P22940_001 | Banana | cytosol | 56.87 | 64.31 |
| KRH21017 | Soybean | mitochondrion | 42.65 | 61.03 |
| KRH05837 | Soybean | mitochondrion | 66.27 | 60.57 |
| Bra015624.1-P | Field mustard | cytosol, mitochondrion | 56.63 | 58.31 |
| CDY65687 | Canola | cytosol, mitochondrion | 52.53 | 58.29 |
| Bra040862.1-P | Field mustard | mitochondrion, nucleus | 55.18 | 57.83 |
| CDY17028 | Canola | mitochondrion, nucleus | 54.94 | 57.72 |
| CDY10578 | Canola | mitochondrion | 5.78 | 57.14 |
| AT1G47270.1 | Thale cress | nucleus | 56.39 | 56.66 |
| KRH11270 | Soybean | cytosol | 52.29 | 56.36 |
| KRH71532 | Soybean | cytosol | 54.22 | 56.25 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 40.0 | 55.89 |
| KRH10476 | Soybean | cytosol, mitochondrion | 57.35 | 55.74 |
| KRH43964 | Soybean | cytosol, mitochondrion | 56.87 | 55.27 |
| KRH50928 | Soybean | cytosol | 47.47 | 54.87 |
| KRH08694 | Soybean | mitochondrion | 54.94 | 53.77 |
| KRH35144 | Soybean | cytosol, mitochondrion | 55.66 | 53.72 |
| KRH70303 | Soybean | cytosol | 54.7 | 53.54 |
| KRG91652 | Soybean | cytosol, mitochondrion | 55.18 | 53.26 |
| KRH21960 | Soybean | mitochondrion | 47.47 | 51.71 |
| KRH27356 | Soybean | mitochondrion | 46.75 | 51.32 |
| KRH02194 | Soybean | cytosol | 47.71 | 50.51 |
| KRH49321 | Soybean | cytosol | 20.72 | 46.99 |
| GSMUA_Achr2P23070_001 | Banana | cytosol, mitochondrion | 21.93 | 46.19 |
| GSMUA_Achr10P... | Banana | nucleus | 22.41 | 44.29 |
| KRH21016 | Soybean | cytosol | 10.6 | 44.0 |
| CDY06747 | Canola | cytosol, mitochondrion | 53.73 | 38.58 |
| Zm00001d033948_P004 | Maize | cytosol | 14.94 | 34.25 |
| KRH25611 | Soybean | cytosol | 23.61 | 33.22 |
| KRH23693 | Soybean | plastid | 19.28 | 22.47 |
Protein Annotations
| EntrezGene:100798958 | MapMan:15.5.21 | Gene3D:3.20.90.10 | EMBL:ACUP02000642 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom |
| EnsemblPlantsGene:GLYMA_01G173700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008289 | GO:GO:0035091 |
| UniProt:I1J8U3 | InterPro:IPR001810 | InterPro:IPR025659 | EnsemblPlants:KRH76777 | ProteinID:KRH76777 | ProteinID:KRH76777.1 |
| ProteinID:KRH76778.1 | PFAM:PF00646 | PFAM:PF01167 | PRINTS:PR01573 | ScanProsite:PS01201 | PANTHER:PTHR16517 |
| PANTHER:PTHR16517:SF74 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS |
| UniParc:UPI0002336DB9 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:51062368..51065755
Molecular Weight (calculated)
46343.6 Da
IEP (calculated)
9.637
GRAVY (calculated)
-0.322
Length
415 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLKSIVREL KEMRDGIGSM SRRGVESRRW NGRTKSHVAP DVILTSLEPI QQGQWANLPP ELLLDIIRRV EDSETTWPAR AVVVYCGSVC KSWRAVTKEI
101: VKTPEQCGRL TFPISLKQPG PRDSPIQCFI RRNRETSTYL LYIGLVPSEN ETDKLLLAAK KVRRATGTDF VISLVADDFF RSSNTYVGKL RSNFLGTKFT
201: IYDSQPPQGA AIQPDNRSSR RFHSKQVSPR VPACNYVVST IAYELNVLRA RGPRRMHCTM NSISVSAVQE GGNAPTPTSF PQIIDEPFSP SPALKGKGPI
301: RDLDNASLPE LLPVQSQDSA EPLVLKNKAP RWHEQLQCWC LNFNGRVTVA SVKNFQLVAA VDPSHNVSAA EQEKVILQFG KIGKDIFTMD YRYPLSAFQA
401: FAICLSSFDT KPACE
101: VKTPEQCGRL TFPISLKQPG PRDSPIQCFI RRNRETSTYL LYIGLVPSEN ETDKLLLAAK KVRRATGTDF VISLVADDFF RSSNTYVGKL RSNFLGTKFT
201: IYDSQPPQGA AIQPDNRSSR RFHSKQVSPR VPACNYVVST IAYELNVLRA RGPRRMHCTM NSISVSAVQE GGNAPTPTSF PQIIDEPFSP SPALKGKGPI
301: RDLDNASLPE LLPVQSQDSA EPLVLKNKAP RWHEQLQCWC LNFNGRVTVA SVKNFQLVAA VDPSHNVSAA EQEKVILQFG KIGKDIFTMD YRYPLSAFQA
401: FAICLSSFDT KPACE
001: MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS LPPELLHDII WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG
Arabidopsis Description
TULP2Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.