Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46301 | Canola | cytosol | 87.31 | 91.01 |
| Bra039620.1-P | Field mustard | cytosol | 87.06 | 90.74 |
| CDY25159 | Canola | cytosol | 85.79 | 90.13 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 29.95 | 66.29 |
| GSMUA_Achr2P23080_001 | Banana | cytosol | 22.59 | 65.44 |
| KRH28692 | Soybean | cytosol | 67.77 | 64.49 |
| KRH76777 | Soybean | cytosol | 66.5 | 63.13 |
| GSMUA_Achr6P09030_001 | Banana | cytosol | 57.11 | 62.15 |
| PGSC0003DMT400058090 | Potato | cytosol | 63.96 | 62.07 |
| VIT_04s0023g01950.t01 | Wine grape | cytosol | 64.97 | 61.99 |
| Solyc03g033980.2.1 | Tomato | cytosol | 63.71 | 61.82 |
| PGSC0003DMT400009280 | Potato | cytosol | 63.71 | 61.67 |
| KRH69894 | Soybean | cytosol | 64.72 | 61.59 |
| Solyc02g085130.2.1 | Tomato | cytosol | 64.21 | 61.56 |
| Solyc04g071750.2.1 | Tomato | cytosol | 62.44 | 61.5 |
| KRH08239 | Soybean | cytosol | 64.47 | 61.35 |
| PGSC0003DMT400016310 | Potato | cytosol | 62.18 | 61.1 |
| Solyc02g062670.2.1 | Tomato | cytosol | 62.94 | 60.34 |
| PGSC0003DMT400040088 | Potato | cytosol | 62.69 | 60.24 |
| GSMUA_Achr2P22940_001 | Banana | cytosol | 52.54 | 56.4 |
| EES07397 | Sorghum | cytosol | 61.68 | 56.12 |
| TraesCS6B01G300200.1 | Wheat | cytosol | 60.41 | 55.87 |
| TraesCS6D01G252800.1 | Wheat | cytosol | 60.15 | 55.76 |
| TraesCS6A01G272800.1 | Wheat | cytosol | 60.15 | 55.24 |
| HORVU6Hr1G068970.3 | Barley | cytosol | 59.64 | 55.04 |
| Zm00001d017773_P001 | Maize | cytosol | 60.91 | 54.92 |
| Zm00001d051568_P001 | Maize | cytosol | 60.41 | 54.59 |
| AT1G47270.1 | Thale cress | nucleus | 55.58 | 53.03 |
| AT2G47900.3 | Thale cress | cytosol | 54.06 | 52.33 |
| AT3G06380.1 | Thale cress | mitochondrion | 47.72 | 49.47 |
| AT1G25280.1 | Thale cress | cytosol | 55.58 | 49.21 |
| AT1G76900.1 | Thale cress | cytosol | 54.82 | 47.47 |
| AT1G53320.1 | Thale cress | mitochondrion | 45.43 | 47.23 |
| AT5G18680.1 | Thale cress | mitochondrion | 46.45 | 47.04 |
| AT1G43640.1 | Thale cress | cytosol | 50.0 | 45.92 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 33.5 | 44.44 |
| GSMUA_Achr2P23070_001 | Banana | cytosol, mitochondrion | 18.78 | 37.56 |
| GSMUA_Achr10P... | Banana | nucleus | 19.04 | 35.71 |
| AT1G61940.2 | Thale cress | cytosol | 22.34 | 33.21 |
| Zm00001d033948_P004 | Maize | cytosol | 13.96 | 30.39 |
| AT1G16070.1 | Thale cress | nucleus | 19.54 | 19.4 |
Protein Annotations
| MapMan:15.5.21 | Gene3D:3.20.90.10 | EntrezGene:816344 | ProteinID:AAD15508.1 | ProteinID:AEC06748.1 | ProteinID:AEC06749.1 |
| EMBL:AK317092 | ArrayExpress:AT2G18280 | EnsemblPlantsGene:AT2G18280 | RefSeq:AT2G18280 | TAIR:AT2G18280 | RefSeq:AT2G18280-TAIR-G |
| EnsemblPlants:AT2G18280.2 | TAIR:AT2G18280.2 | EMBL:AY045773 | Unigene:At.21504 | Symbol:AtTLP2 | UniProt:B9DGB6 |
| EMBL:BT008627 | EMBL:BT025314 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009058 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009607 |
| GO:GO:0009620 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0035091 | InterPro:IPR001810 | InterPro:IPR025659 |
| RefSeq:NP_001031369.1 | RefSeq:NP_849975.1 | PFAM:PF00646 | PFAM:PF01167 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PRINTS:PR01573 | ScanProsite:PS01200 | ScanProsite:PS01201 | PANTHER:PTHR16517 | PANTHER:PTHR16517:SF74 |
| UniProt:Q8GVE5 | SUPFAM:SSF54518 | SUPFAM:SSF81383 | InterPro:Tubby-like_C | InterPro:Tubby_C | InterPro:Tubby_C_CS |
| UniParc:UPI00000AE0EC | SEG:seg | : | : | : | : |
Description
TULP2Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6]
Coordinates
chr2:+:7945998..7948468
Molecular Weight (calculated)
43880.6 Da
IEP (calculated)
9.111
GRAVY (calculated)
-0.361
Length
394 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS LPPELLHDII WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.