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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
  • plastid 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P23080_001 Banana cytosol 54.49 71.32
CDY10578 Canola mitochondrion 14.04 59.52
GSMUA_Achr6P09030_001 Banana cytosol 79.78 39.23
VIT_04s0023g01950.t01 Wine grape cytosol 82.58 35.59
GSMUA_Achr7P13870_001 Banana mitochondrion, plastid 58.99 35.59
GSMUA_Achr2P22940_001 Banana cytosol 73.03 35.42
KRH76777 Soybean cytosol 81.46 34.94
GSMUA_Achr7P25250_001 Banana cytosol 62.36 34.91
KRH28692 Soybean cytosol 80.9 34.78
GSMUA_Achr4P01150_001 Banana cytosol 61.8 34.48
VIT_18s0001g12660.t01 Wine grape cytosol 79.78 34.13
TraesCS6D01G252800.1 Wheat cytosol 81.46 34.12
Solyc02g085130.2.1 Tomato cytosol 78.65 34.06
GSMUA_Achr3P31460_001 Banana cytosol 61.24 34.06
TraesCS6B01G300200.1 Wheat cytosol 81.46 34.04
Solyc04g071750.2.1 Tomato cytosol 76.4 34.0
HORVU6Hr1G068970.3 Barley cytosol 81.46 33.96
PGSC0003DMT400009280 Potato cytosol 77.53 33.91
TraesCS6A01G272800.1 Wheat cytosol 81.46 33.8
PGSC0003DMT400016310 Potato cytosol 75.28 33.42
Os02t0705300-01 Rice cytosol 80.34 33.41
PGSC0003DMT400058090 Potato cytosol 75.28 33.0
Solyc03g033980.2.1 Tomato cytosol 74.72 32.76
Zm00001d017773_P001 Maize cytosol 80.34 32.72
KRH69894 Soybean cytosol 75.84 32.61
Zm00001d051568_P001 Maize cytosol 79.78 32.57
PGSC0003DMT400040088 Potato cytosol 74.72 32.44
Solyc02g062670.2.1 Tomato cytosol 74.72 32.36
EES07397 Sorghum cytosol 78.65 32.33
GSMUA_Achr8P07950_001 Banana mitochondrion 68.54 32.11
CDY25159 Canola cytosol 66.85 31.73
KRH08239 Soybean cytosol 73.6 31.64
GSMUA_Achr1P11290_001 Banana cytosol 71.91 31.53
CDY46301 Canola cytosol 66.85 31.48
Bra039620.1-P Field mustard cytosol 66.85 31.48
KRH15179 Soybean cytosol 72.47 30.5
GSMUA_Achr8P32840_001 Banana mitochondrion 69.66 30.17
AT2G18280.2 Thale cress cytosol 66.29 29.95
GSMUA_Achr3P17440_001 Banana cytosol 66.85 29.53
GSMUA_Achr10P... Banana mitochondrion 61.24 29.46
CDY65687 Canola cytosol, mitochondrion 61.24 29.14
AT1G47270.1 Thale cress nucleus 67.42 29.06
GSMUA_AchrUn_... Banana cytosol, mitochondrion 48.31 28.96
Bra015624.1-P Field mustard cytosol, mitochondrion 65.17 28.78
GSMUA_Achr9P08860_001 Banana cytosol, mitochondrion 69.1 28.74
GSMUA_Achr4P10540_001 Banana mitochondrion 61.24 28.39
CDY17028 Canola mitochondrion, nucleus 62.36 28.1
Bra040862.1-P Field mustard mitochondrion, nucleus 62.36 28.03
KRH05837 Soybean mitochondrion 71.35 27.97
GSMUA_Achr3P22480_001 Banana cytosol 53.37 27.3
GSMUA_Achr11P... Banana cytosol 58.43 25.06
GSMUA_Achr9P29600_001 Banana cytosol, mitochondrion 38.76 22.4
CDY06747 Canola cytosol, mitochondrion 64.61 19.9
GSMUA_Achr1P10180_001 Banana cytosol, mitochondrion, nucleus, plastid 22.47 10.9
Zm00001d033948_P004 Maize cytosol 8.43 8.29
GSMUA_Achr2P23070_001 Banana cytosol, mitochondrion 6.18 5.58
GSMUA_Achr10P... Banana nucleus 5.62 4.76
Protein Annotations
EnsemblPlants:GSMUA_Achr10P20520_001EnsemblPlants:GSMUA_Achr10T20520_001EnsemblPlantsGene:GSMUA_Achr10G20520_001Gene3D:3.20.90.10InterPro:IPR025659InterPro:Tubby-like_C
InterPro:Tubby_CInterPro:Tubby_C_CSPANTHER:PTHR16517PANTHER:PTHR16517:SF75PFAM:PF01167PRINTS:PR01573
ScanProsite:PS01200ScanProsite:PS01201SUPFAM:SSF54518UniParc:UPI00029648A3UniProt:M0RJX7MapMan:15.5.21
Description
Tubby-like F-box protein 5 [Source:GMGC_GENE;Acc:GSMUA_Achr10G20520_001]
Coordinates
chr10:-:26472121..26472804
Molecular Weight (calculated)
19919.0 Da
IEP (calculated)
10.121
GRAVY (calculated)
-0.274
Length
178 amino acids
Sequence
(BLAST)
001: MSTRSNFLGT KFTVYDSQPP CDAAVSSGSR STRRIHSKQV SPRVPAGNYN IATIAYELNV LRTRGPRRIQ CTMHSLPSLA TNGAPLMLKN KAPRWHEQLQ
101: CWCLNFRGRV TVASVKNFQL VAAVDPSHHV SHAEQEKVIL QFGKIGKDIF TMDYRYPLSA FQAFAICLTS FDTKPACE
Best Arabidopsis Sequence Match ( AT2G18280.1 )
(BLAST)
001: MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS LPPELLHDII WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC
101: GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA
201: SSTAQAQPNR RLHPKQAAPK LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG ETITTDKEIP DNSPSLRDQP
301: LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG
Arabidopsis Description
TULP2Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.