Factsheet for GSMUA_Achr8P32840_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P07950_001	Banana	mitochondrion	80.05	86.58
GSMUA_Achr3P22480_001	Banana	cytosol	71.53	84.48
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	61.56	82.14
GSMUA_Achr9P08860_001	Banana	cytosol, mitochondrion	80.54	77.34
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	30.17	69.66
GSMUA_Achr2P23080_001	Banana	cytosol	21.41	64.71
GSMUA_Achr11P...	Banana	cytosol	63.75	63.13
GSMUA_Achr1P11290_001	Banana	cytosol	60.58	61.33
GSMUA_Achr3P17440_001	Banana	cytosol	58.88	60.05
GSMUA_Achr7P25250_001	Banana	cytosol	44.28	57.23
GSMUA_Achr6P09030_001	Banana	cytosol	50.37	57.18
GSMUA_Achr4P01150_001	Banana	cytosol	44.04	56.74
GSMUA_Achr3P31460_001	Banana	cytosol	42.58	54.69
GSMUA_Achr2P22940_001	Banana	cytosol	46.47	52.04
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	36.25	50.51
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	35.77	49.49
GSMUA_Achr10P...	Banana	mitochondrion	44.04	48.92
GSMUA_Achr4P10540_001	Banana	mitochondrion	45.01	48.18
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	19.71	41.12
GSMUA_Achr10P...	Banana	nucleus	18.73	36.67
GSMUA_Achr1P10180_001	Banana	cytosol, mitochondrion, nucleus, plastid	18.49	20.71

Protein Annotations

Gene3D:1.20.1280.50	MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr8G32840_001	EnsemblPlants:GSMUA_Achr8P32840_001	EnsemblPlants:GSMUA_Achr8T32840_001	InterPro:IPR001810
InterPro:IPR025659	UniProt:M0TVN6	PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	PANTHER:PTHR16517	PANTHER:PTHR16517:SF45	SUPFAM:SSF54518	SUPFAM:SSF81383	InterPro:Tubby-like_C
InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000294C32A	SEG:seg	:	:

Description

Tubby-like F-box protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr8G32840_001]

Coordinates

chr8:-:34092991..34097547

Molecular Weight (calculated)

46073.8 Da

IEP (calculated)

10.270

GRAVY (calculated)

-0.297

Length

411 amino acids

Sequence
(BLAST)

001: MSFRSIVRDV RDSFGSLSRR SFEVRLSSLS GHLRGKSQVF VPEPHDTPPV IQSSRWASLP PELLRDVIKR LEASEGTWPS RKDVVACAAV CRAWREMCKE
101: IVRSPEFCGK LTFPISLKQP GTRDGMIQCF IKRDKSKLTY HLYLCLSPAV LVENGKFLLS AKRIRRTACT EYVISMDANN ISRSTNTYIG KLRSNFLGTK
201: FIIYDTQPPY NGAAICPPGR TSRRFYSKKV SPKVPSGSYS IAQVTYELNV LGTRGPRRMH CVMHSIPASA LEPGGTVPGQ PDSLVSRSLE ESFRSMSFSK
301: SIMDRGEAKE RPLVLRNKPP RWHEQLQCWC LNFRGRVTVA SVKNFQLIAA SQPAAGAPTP SQPAPSEHDK IILQFGKVAK DMFTMDYRYP LSAFQAFAIC
401: LSSFDTKLAC E

Best Arabidopsis Sequence Match ( AT1G25280.1 )
(BLAST)

001: MSFRGIVQDL RDGFGSLSRR SFDFRLSSLH KGKAQGSSFR EYSSSRDLLS PVIVQTSRWA NLPPELLFDV IKRLEESESN WPARKHVVAC ASVCRSWRAM
101: CQEIVLGPEI CGKLTFPVSL KQPGPRDAMI QCFIKRDKSK LTFHLFLCLS PALLVENGKF LLSAKRTRRT TRTEYIISMD ADNISRSSNS YLGKLRSNFL
201: GTKFLVYDTQ PPPNTSSSAL ITDRTSRSRF HSRRVSPKVP SGSYNIAQIT YELNVLGTRG PRRMHCIMNS IPISSLEPGG SVPNQPEKLV PAPYSLDDSF
301: RSNISFSKSS FDHRSLDFSS SRFSEMGISC DDNEEEASFR PLILKNKQPR WHEQLQCWCL NFRGRVTVAS VKNFQLVAAR QPQPQGTGAA AAPTSAPAHP
401: EQDKVILQFG KVGKDMFTMD YRYPLSAFQA FAICLSSFDT KLACE

Arabidopsis Description

TULP10Tubby-like F-box protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FRH7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.