Factsheet for GSMUA_Achr7P25250_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P31460_001	Banana	cytosol	87.42	86.88
GSMUA_Achr4P01150_001	Banana	cytosol	83.02	82.76
CDY02510	Canola	cytosol	73.9	73.21
CDY25719	Canola	cytosol	73.9	71.21
GSMUA_Achr4P10540_001	Banana	mitochondrion	83.33	69.01
TraesCS3B01G304600.1	Wheat	cytosol	74.53	67.52
TraesCS3D01G270500.1	Wheat	cytosol	74.53	66.76
Os01t0674500-01	Rice	cytosol	74.53	66.57
EES03425	Sorghum	plastid	75.16	66.39
HORVU3Hr1G061930.1	Barley	cytosol	74.21	66.29
Zm00001d011578_P003	Maize	nucleus	74.53	66.2
TraesCS3A01G270800.1	Wheat	cytosol	73.9	66.2
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	61.32	66.1
GSMUA_Achr10P...	Banana	mitochondrion	76.73	65.95
Os05t0560400-00	Rice	cytosol	72.96	65.91
KRH27356	Soybean	mitochondrion	76.73	64.55
KRH21960	Soybean	mitochondrion	76.73	64.04
Os05t0514300-01	Rice	mitochondrion	74.21	63.44
Zm00001d038691_P001	Maize	mitochondrion	72.33	62.67
AT1G53320.1	Thale cress	mitochondrion	74.53	62.53
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	34.91	62.36
EES18499	Sorghum	mitochondrion	72.33	61.83
CDY45927	Canola	cytosol, plastid	72.64	61.6
CDY25863	Canola	cytosol, mitochondrion	72.96	61.54
Bra041095.1-P	Field mustard	cytosol, mitochondrion	72.96	61.54
VIT_19s0014g01250.t01	Wine grape	mitochondrion	77.04	61.1
TraesCS1A01G333900.1	Wheat	mitochondrion	71.38	60.86
TraesCS1B01G347200.1	Wheat	mitochondrion	71.07	60.59
TraesCS1D01G336400.1	Wheat	mitochondrion	71.38	60.37
PGSC0003DMT400018209	Potato	mitochondrion	73.27	60.36
Bra030942.1-P	Field mustard	mitochondrion	74.21	60.2
Solyc07g062390.2.1	Tomato	mitochondrion	72.64	59.84
Zm00001d043895_P003	Maize	cytosol	69.81	58.73
HORVU1Hr1G076900.1	Barley	cytosol	70.13	57.92
OQU78419	Sorghum	cytosol	66.67	56.23
GSMUA_Achr2P23080_001	Banana	cytosol	22.96	53.68
Os01t0759100-01	Rice	cytosol, plastid	61.64	53.26
GSMUA_Achr8P07950_001	Banana	mitochondrion	57.23	47.89
GSMUA_Achr6P09030_001	Banana	cytosol	52.52	46.13
GSMUA_Achr1P11290_001	Banana	cytosol	58.49	45.81
GSMUA_Achr2P22940_001	Banana	cytosol	52.52	45.5
GSMUA_Achr3P17440_001	Banana	cytosol	56.29	44.42
GSMUA_Achr8P32840_001	Banana	mitochondrion	57.23	44.28
GSMUA_Achr9P29600_001	Banana	cytosol, mitochondrion	42.14	43.51
GSMUA_Achr3P22480_001	Banana	cytosol	47.48	43.39
GSMUA_Achr9P08860_001	Banana	cytosol, mitochondrion	55.35	41.12
GSMUA_Achr11P...	Banana	cytosol	49.69	38.07
HORVU0Hr1G001350.2	Barley	cytosol	41.2	35.12
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	32.39	34.68
GSMUA_Achr2P23070_001	Banana	cytosol, mitochondrion	15.41	24.87
GSMUA_Achr10P...	Banana	nucleus	14.15	21.43
GSMUA_Achr1P10180_001	Banana	cytosol, mitochondrion, nucleus, plastid	20.75	17.98

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSMUA_Achr7G25250_001	EnsemblPlants:GSMUA_Achr7P25250_001	EnsemblPlants:GSMUA_Achr7T25250_001	InterPro:IPR001810	InterPro:IPR025659	UniProt:M0TKL1
PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	ScanProsite:PS01201	PANTHER:PTHR16517
PANTHER:PTHR16517:SF50	SUPFAM:SSF54518	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI00029555C8
SEG:seg	:	:	:	:	:

Description

Tubby-like F-box protein 9 [Source:GMGC_GENE;Acc:GSMUA_Achr7G25250_001]

Coordinates

chr7:+:26963494..26967737

Molecular Weight (calculated)

35475.6 Da

IEP (calculated)

9.957

GRAVY (calculated)

-0.360

Length

318 amino acids

Sequence
(BLAST)

001: MPPELIGEIV QRVEAGGERW PLRKDVVSCA CLCRRWREVT RGIVRPPLET GKITFPSSLK EPGPADIPIQ CFIKRNKKNS TFYLYLGLTQ TFMDKGKFLL
101: AARRFRHGAR TEYIISLDVD GLSQGSNAYV GKLRSNFLGT NFRIYDSQPP HSGAKASSSR ASRRFASKQI SPQVPAGNFE VGQVSYKFNL LKSRGPRRMH
201: CTLECPVGNS EEDSPKPKAH SGGVPLVLRN KAPRWHEHLQ CWCLNFHGRV TVASVKNFQL VATADASQPP GVGDEETVLL QFGKFGDDLF TMDYRQPLSA
301: FQAFAICLTS FGTKFACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.