Factsheet for Bra041095.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003735.1-P
Bra008231.1-P
Bra015801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53320.1	Bra003735.1-P	AT1G75950.1	25168737
AT1G53320.1	Bra008231.1-P	AT1G75950.1	25168737
AT1G53320.1	Bra015801.1-P	AT1G75950.1	25168737

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25863	Canola	cytosol, mitochondrion	99.73	99.73
AT1G53320.1	Thale cress	mitochondrion	86.74	86.28
Bra030942.1-P	Field mustard	mitochondrion	88.59	85.2
GSMUA_Achr7P25250_001	Banana	cytosol	61.54	72.96
GSMUA_Achr3P31460_001	Banana	cytosol	61.01	71.88
GSMUA_Achr4P01150_001	Banana	cytosol	60.48	71.47
KRH27356	Soybean	mitochondrion	71.35	71.16
KRH21960	Soybean	mitochondrion	71.35	70.6
VIT_19s0014g01250.t01	Wine grape	mitochondrion	70.29	66.08
Solyc07g062390.2.1	Tomato	mitochondrion	66.84	65.28
PGSC0003DMT400018209	Potato	mitochondrion	66.58	65.03
TraesCS3B01G304600.1	Wheat	cytosol	59.68	64.1
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	49.6	63.39
TraesCS3D01G270500.1	Wheat	cytosol	59.68	63.38
TraesCS3A01G270800.1	Wheat	cytosol	59.42	63.1
Zm00001d011578_P003	Maize	nucleus	59.68	62.85
Os01t0674500-01	Rice	cytosol	59.15	62.64
HORVU3Hr1G061930.1	Barley	cytosol	59.15	62.64
EES03425	Sorghum	plastid	58.89	61.67
GSMUA_Achr4P10540_001	Banana	mitochondrion	62.33	61.2
Os05t0560400-00	Rice	cytosol	57.03	61.08
Os05t0514300-01	Rice	mitochondrion	59.95	60.75
Zm00001d038691_P001	Maize	mitochondrion	58.09	59.67
EES18499	Sorghum	mitochondrion	58.62	59.41
GSMUA_Achr10P...	Banana	mitochondrion	58.09	59.19
TraesCS1A01G333900.1	Wheat	mitochondrion	57.56	58.18
TraesCS1B01G347200.1	Wheat	mitochondrion	57.29	57.91
TraesCS1D01G336400.1	Wheat	mitochondrion	57.56	57.71
Zm00001d043895_P003	Maize	cytosol	56.23	56.08
HORVU1Hr1G076900.1	Barley	cytosol	54.64	53.51
OQU78419	Sorghum	cytosol	53.05	53.05
Os01t0759100-01	Rice	cytosol, plastid	49.87	51.09
Bra020754.1-P	Field mustard	cytosol	45.09	49.42
Bra039620.1-P	Field mustard	cytosol	47.48	47.35
Bra021446.1-P	Field mustard	cytosol	48.28	45.27
Bra002179.1-P	Field mustard	mitochondrion	46.42	43.86
Bra015624.1-P	Field mustard	cytosol, mitochondrion	45.89	42.93
Bra024763.1-P	Field mustard	cytosol	49.34	42.47
Bra040862.1-P	Field mustard	mitochondrion, nucleus	44.56	42.42
Bra010985.1-P	Field mustard	cytosol	49.07	42.14
Bra012486.1-P	Field mustard	cytosol	49.34	41.99
Bra040803.1-P	Field mustard	cytosol	49.34	41.61
Bra015711.1-P	Field mustard	cytosol, mitochondrion	48.81	39.57
HORVU0Hr1G001350.2	Barley	cytosol	32.36	32.71
Bra026081.1-P	Field mustard	nucleus	19.63	19.02

Protein Annotations

MapMan:15.5.21	Gene3D:3.20.90.10	EnsemblPlantsGene:Bra041095	EnsemblPlants:Bra041095.1	EnsemblPlants:Bra041095.1-P	InterPro:F-box_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR025659	UniProt:M4FJ15
PFAM:PF00646	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200	PANTHER:PTHR16517	PANTHER:PTHR16517:SF50
SUPFAM:SSF54518	InterPro:Tubby-like_C	InterPro:Tubby_C	InterPro:Tubby_C_CS	UniParc:UPI000253ECBC	SEG:seg

Description

AT1G53320 (E=9e-176) AtTLP7 | AtTLP7 (TUBBY LIKE PROTEIN 7); phosphoric diester hydrolase/ transcription factor

Coordinates

chrScaffold000515:+:1739..3982

Molecular Weight (calculated)

42140.2 Da

IEP (calculated)

10.186

GRAVY (calculated)

-0.507

Length

377 amino acids

Sequence
(BLAST)

001: MPLSRSLLSR RFSISSRDHQ GDTPTEPESR MLPPSSNVSG SSWSAMLPEL LSEIIRRVED TEDHWPLRRD VVACACVSNK WREITQETVR SPRNSGKITF
101: PSCLKLPGPR DFSNQCLIKR NKRTSTFYLY LPLTPSFTDK GKFLLAARRF RTGAYTEYVI SLDAHDFSQA SNAYVGKLRS DFLGTNFTVY DSKPPHNGAK
201: PSHGKASRRF ASKQISPQVP AGNFEVGHVS YKFNLLKSRG PRRMISTLHC PSSSPPPPPS SSTNQRLCDA TKMMKKPIKD GSGLTILKNK APRWHEHLQC
301: WCLNFHGRVT VASVKNFQLV ATVDQSQPSG KGDEETVLLQ FGKVGDDTFT MDYRQPLSAF QAFAICLASF GTKLACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.