Factsheet for TraesCS3D01G270500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G304600.1	Wheat	cytosol	98.87	100.0
TraesCS3A01G270800.1	Wheat	cytosol	98.31	98.31
HORVU3Hr1G061930.1	Barley	cytosol	95.21	94.94
Os01t0674500-01	Rice	cytosol	91.83	91.57
Zm00001d011578_P003	Maize	nucleus	86.2	85.47
EES03425	Sorghum	plastid	86.48	85.28
Zm00001d043895_P003	Maize	cytosol	82.25	77.25
GSMUA_Achr7P25250_001	Banana	cytosol	66.76	74.53
GSMUA_Achr3P31460_001	Banana	cytosol	66.76	74.06
GSMUA_Achr4P01150_001	Banana	cytosol	65.92	73.35
CDY02510	Canola	cytosol	63.66	70.41
CDY25719	Canola	cytosol	63.94	68.79
GSMUA_Achr4P10540_001	Banana	mitochondrion	69.3	64.06
GSMUA_Achr10P...	Banana	mitochondrion	66.48	63.78
KRH27356	Soybean	mitochondrion	65.92	61.9
TraesCS1D01G336400.1	Wheat	mitochondrion	65.07	61.44
KRH21960	Soybean	mitochondrion	65.92	61.42
GSMUA_Achr7P13870_001	Banana	mitochondrion, plastid	50.7	61.02
AT1G53320.1	Thale cress	mitochondrion	63.94	59.89
CDY25863	Canola	cytosol, mitochondrion	63.38	59.68
Bra041095.1-P	Field mustard	cytosol, mitochondrion	63.38	59.68
CDY45927	Canola	cytosol, plastid	62.82	59.47
Bra030942.1-P	Field mustard	mitochondrion	65.35	59.18
VIT_19s0014g01250.t01	Wine grape	mitochondrion	65.92	58.35
Solyc07g062390.2.1	Tomato	mitochondrion	62.54	57.51
PGSC0003DMT400018209	Potato	mitochondrion	62.54	57.51
TraesCS2D01G122900.1	Wheat	cytosol	49.58	47.06
TraesCS4D01G164200.1	Wheat	cytosol, plastid	51.55	45.3
TraesCS1D01G273200.1	Wheat	mitochondrion	52.96	41.41
TraesCS6D01G252800.1	Wheat	cytosol	49.3	41.18
TraesCS3D01G371600.1	Wheat	mitochondrion	51.27	40.53
TraesCS4D01G110100.1	Wheat	golgi	49.58	40.0
TraesCS5D01G132000.1	Wheat	cytosol, mitochondrion	49.3	39.86
TraesCS7D01G323100.1	Wheat	mitochondrion	50.42	39.08
TraesCS2D01G584900.1	Wheat	cytosol, mitochondrion	49.86	37.74
TraesCS6D01G138700.1	Wheat	plastid	16.9	15.38

Protein Annotations

EnsemblPlants:TraesCS3D01G270500.1	EnsemblPlantsGene:TraesCS3D01G270500	Gene3D:3.20.90.10	InterPro:IPR025659	InterPro:Tubby-like_C	InterPro:Tubby_C
InterPro:Tubby_C_CS	PANTHER:PTHR16517	PANTHER:PTHR16517:SF35	PFAM:PF01167	PRINTS:PR01573	ScanProsite:PS01200
ScanProsite:PS01201	SEG:seg	SUPFAM:SSF54518	MapMan:15.5.21	:	:

Description

No Description!

Coordinates

chr3D:+:375192988..375198387

Molecular Weight (calculated)

40137.6 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.630

Length

355 amino acids

Sequence
(BLAST)

001: MPREEPPAAE VSEVAETGEE KEDGQPEEQE ERWARLLPEL LSEVVRRVEA SGGERWPARK DVVSCACVCR RWRDAAVAVV RPPAVSGKIT FPSSLKQPGP
101: REFPMQCFIK RNKKNSTFYL YLGLTTATVD KGKFLMAARR FRRGPHTEYI ISLDADDLSQ GSNAYMGKLR SDFWGTNFKV YDSKPPHDGA KASSSRSSRR
201: FGSRRISPQV SAGNYEVGQL SYKYNLLKSR GPRRMYCALE CPSPQETWEN SLKTKFRKPM GTTVLRNKAP RWHEHLQCWC LNFHGRVTVA SVKNFQLSVA
301: ADPNDPTGSR DEETVLLQFG KVDDDIFTMD YRQPLSAFQA FAISLSSFGT KLACE

Best Arabidopsis Sequence Match ( AT1G53320.1 )
(BLAST)

001: MPLSRSLLSR RISNSFRFHQ GETTTAPESE SIPPPSNMAG SSSWSAMLPE LLGEIIRRVE ETEDRWPQRR DVVTCACVSK KWREITHDFA RSSLNSGKIT
101: FPSCLKLPGP RDFSNQCLIK RNKKTSTFYL YLALTPSFTD KGKFLLAARR FRTGAYTEYI ISLDADDFSQ GSNAYVGKLR SDFLGTNFTV YDSQPPHNGA
201: KPSNGKASRR FASKQISPQV PAGNFEVGHV SYKFNLLKSR GPRRMVSTLR CPSPSPSSSS AGLSSDQKPC DVTKIMKKPN KDGSSLTILK NKAPRWHEHL
301: QCWCLNFHGR VTVASVKNFQ LVATVDQSQP SGKGDEETVL LQFGKVGDDT FTMDYRQPLS AFQAFAICLT SFGTKLACE

Arabidopsis Description

TULP7Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:A0A178WNG9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.